Training materials
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Related resources: Associated Training Datasets
and Tools: gffcompare
and Authors: Cristóbal Gallardo
2 materials found
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Scientific topic
- Comparative transcriptomics2
- Transcriptome2
- Transcriptomics2
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Tool
- gffcompare
- Galaxy11
- MultiQC4
- fastp4
- Biopython2
- DESeq22
- Falco2
- FastQC2
- IsoformSwitchAnalyzeR2
- PfamScan2
- QUAST2
- RSeQC2
- SAMtools2
- STAR2
- Salmon2
- StringTie2
- Targetfinder.org2
- Trim Galore2
- gffread2
- miRDeep22
- pyGenomeTracks2
- rnaQUAST2
- BEDTools1
- BUSCO1
- BamTools1
- Bwa-mem21
- Cutadapt1
- Galactic Circos1
- GenomeScope 2.01
- JBrowse1
- Merqury1
- Minimap21
- NanoPlot1
- SALSA1
- SCANPY1
- Unicycler1
- gfastats1
- kraken21
- purge_dups1
- seqtk1
- taxonomy_krona_chart1
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Content provider
- GTN2
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Keyword
- Transcriptomics2
- alternative splicing1
- isoform switching1
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Competency level
- Advanced1
- Beginner1
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Licence
- Creative Commons Attribution 4.0 International2
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Target audience
- Students2
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Author
- Cristóbal Gallardo
- James Johnson2
- Subina Mehta2
- Katherine Do1
- Lucille Delisle1
- Pratik Jagtap1
- Praveen Kumar1
- Ray Sajulga1
- Timothy J. Griffin1
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Contributor
- Björn Grüning2
- Cristóbal Gallardo2
- Helena Rasche2
- Lucille Delisle2
- Wolfgang Maier2
- Pavankumar Videm1
- Saskia Hiltemann1
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Resource type
- e-learning1
- slides1
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Related resource
- Associated Training Datasets
- Associated Workflows2
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