Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Diffraction experiment5
    • Imaging5
    • Microscopy5
    • Microscopy imaging5
    • Optical super resolution microscopy5
    • Photonic force microscopy5
    • Photonic microscopy5
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • Galaxy Image Analysis4
    • scikit-image3
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • Imaging5
    • Image segmentation3
    • Overlay3
    • 3D image1
    • Conversion1
    • Data handling1
    • Data management1
    • Data sharing1
    • Deep learning1
    • IDR dataset1
    • Image annotation1
    • Multi-channel image1
    • Object counting1
    • Parameter optimisation1
    • ROI selection1
    • Rasterisation1
    • Spot detection1
    • Tessellation1
    • Validation1
    • Volume rendering1
    • Show N_FILTERS more
    • Competency level
    • Intermediate3
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Riccardo Massei
    • Bérénice Batut34
    • Saskia Hiltemann18
    • Björn Grüning15
    • Subina Mehta15
    • Yvan Le Bras13
    • Anthony Bretaudeau12
    • Helena Rasche12
    • Mehmet Tekman11
    • Wolfgang Maier11
    • Anton Nekrutenko10
    • Maria Doyle10
    • Marie Josse10
    • Melanie Föll10
    • Pavankumar Videm10
    • Pratik Jagtap10
    • Simon Bray10
    • Wendi Bacon10
    • Anne Fouilloux9
    • Anup Kumar8
    • Cristóbal Gallardo8
    • Delphine Lariviere8
    • Timothy J. Griffin8
    • Daniel Blankenberg7
    • Diana Chiang Jurado7
    • Julia Jakiela7
    • Matthias Fahrner7
    • Paul Zierep7
    • Praveen Kumar7
    • Anika Erxleben6
    • Anna Syme6
    • Dave Clements6
    • Emma Leith6
    • Florian Christoph Sigloch6
    • Leonid Kostrykin6
    • Nicola Soranzo6
    • Simon Gladman6
    • Dechen Bhuming5
    • Erwan Corre5
    • James Johnson5
    • Katherine Do5
    • Ray Sajulga5
    • Stéphanie Robin5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Beatriz Serrano-Solano4
    • Christopher Barnett4
    • Clemens Blank4
    • Coline Royaux4
    • Daniela Schneider4
    • Jeremy Goecks4
    • Joachim Wolff4
    • Junhao Qiu4
    • Kaivan Kamali4
    • Khaled Jum'ah4
    • Krzysztof Poterlowicz4
    • Laura Leroi4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Marisa Loach4
    • Marius van den Beek4
    • Paulo Cilas Morais Lyra Junior4
    • Vivek Bhardwaj4
    • Alex Ostrovsky3
    • Alyssa Pybus3
    • Bazante Sanders3
    • Belinda Phipson3
    • Fidel Ramirez3
    • Florian Heyl3
    • Gildas Le Corguillé3
    • Guillaume Gricourt3
    • Helge Hecht3
    • Ioana Popescu3
    • Jean-Loup Faulon3
    • Joan Hérisson3
    • Katarzyna Kamieniecka3
    • Kenza Bazi-Kabbaj3
    • Marie Crane3
    • Mo Heydarian3
    • Morgan Howells3
    • Nadia Goué3
    • Polina Polunina3
    • Romane LIBOUBAN3
    • Tharindu Senapathi3
    • Thomas Duigou3
    • Anne Pajon2
    • Christoph Stritt2
    • Daniela Brites2
    • David Christiany2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Engy Nasr2
    • Florence Combes2
    • Friederike Dündar2
    • Galo A. Goig2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Jayadev Joshi2
    • Jean-Karim Hériché2
    • Show N_FILTERS more
    • Contributor
    • Beatriz Serrano-Solano5
    • Leonid Kostrykin5
    • Saskia Hiltemann5
    • Björn Grüning4
    • Riccardo Massei4
    • Armin Dadras1
    • Daniel Franco Barranco1
    • Diana Chiang Jurado1
    • Even Moa Myklebust1
    • Maria Arrate Munoz Barrutia1
    • Martin Čech1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Associated Training Datasets3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Filter limit reached, please log in to apply additional filters.

Resource type: e-learning

and Related resources: Associated Workflows

and Authors: Riccardo Massei

5 e-learning materials found
  • ELIXIR TeSS

    e-learning

    Execute a BiaPy workflow in Galaxy

    •• Intermediate
    Imaging 3D image Conversion Deep learning Image annotation Image segmentation Imaging Overlay Volume rendering
  • ELIXIR TeSS

    e-learning

    Voronoi segmentation

    •• Intermediate
    Imaging Image segmentation Imaging Multi-channel image Object counting Overlay Tessellation
  • ELIXIR TeSS

    e-learning

    Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy

    • Beginner
    Imaging Image segmentation Imaging Parameter optimisation Validation
  • ELIXIR TeSS

    e-learning

    Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines

    • Beginner
    Imaging IDR dataset Imaging Overlay Rasterisation Spot detection
  • ELIXIR TeSS

    e-learning

    Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy

    •• Intermediate
    Imaging Data handling Data management Data sharing Imaging ROI selection
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.