Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Bottom-up proteomics16
    • Discovery proteomics16
    • MS-based targeted proteomics16
    • MS-based untargeted proteomics16
    • Metaproteomics16
    • Peptide identification16
    • Protein and peptide identification16
    • Proteomics16
    • Quantitative proteomics16
    • Targeted proteomics16
    • Top-down proteomics16
    • Metagenomics12
    • Shotgun metagenomics12
    • Community analysis10
    • Environmental microbiology10
    • Microbial ecology10
    • Microbiome10
    • Molecular community analysis10
    • Taxonomy5
    • Metatranscriptomics4
    • Proteogenomics4
    • Biodiversity2
    • Biological sequences2
    • Function analysis2
    • Functional analysis2
    • Protein function analysis2
    • Protein function prediction2
    • Sequence analysis2
    • Sequence databases2
    • Show N_FILTERS more
    • Tool
    • Galaxy24
    • msConvert4
    • Biopython3
    • Cutadapt3
    • FastQC3
    • FreeBayes3
    • GraPhlAn3
    • HISAT23
    • MetaPhlAn3
    • MultiQC3
    • SortMeRNA3
    • StringTie3
    • bed to protein map3
    • customProDB3
    • export2graphlan3
    • gffcompare3
    • humann3
    • taxonomy_krona_chart3
    • BLAST2
    • Combine Metaphlan and HUMAnN2
    • MaxQuant2
    • UniProt2
    • Unipept2
    • metaQuantome2
    • EncyclopeDIA1
    • FlashLFQ1
    • HUMAnN21
    • MSstats1
    • MetaNovo1
    • OptiType1
    • STAR1
    • Seq2HLA1
    • The Immune Epitope Database (IEDB)1
    • mzToSQLite1
    • Show N_FILTERS more
    • Content provider
    • GTN27
    • Show N_FILTERS more
    • Keyword
    • Proteomics16
    • Microbiome8
    • label-free8
    • microgalaxy6
    • label-TMT115
    • metatranscriptomics4
    • metagenomics3
    • proteogenomics3
    • DIA1
    • Show N_FILTERS more
    • Competency level
    • Beginner20
    • Intermediate6
    • Not specified1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International27
    • Show N_FILTERS more
    • Target audience
    • Students27
    • Show N_FILTERS more
    • Author
    • Subina Mehta
    • Helena Rasche127
    • Bérénice Batut111
    • SIB Swiss Institute of Bioinformatics107
    • Martin Morgan97
    • Saskia Hiltemann66
    • The Carpentries Incubator52
    • Björn Grüning50
    • Simon Gladman37
    • The Gulbenkian Training Programme in Bioinformatics36
    • bioinformatics.ca35
    • bebatut32
    • bgruening32
    • Anthony Bretaudeau28
    • Anton Nekrutenko28
    • Yvan Le Bras28
    • Nate Coraor27
    • Donat Agosti25
    • John Chilton25
    • Julia Giora25
    • Nicola Soranzo25
    • Plazi Verein25
    • Teaching materials at the Harvard Chan Bioinformatics Core25
    • Saskia Lawson-Tovey24
    • The Carpentries24
    • Egon Willighagen22
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • NBIS - National Bioinformatics Infrastructure Sweden20
    • posit-conf-202320
    • Anne Fouilloux19
    • Coding for Reproducible Research Initiative19
    • Marie Josse19
    • Wendi Bacon19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Laura Cooper18
    • Terri Attwood18
    • UC Davis Bioinformatics Core Training Page18
    • András Aszódi17
    • Data Carpentry17
    • Mehmet Tekman17
    • posit::conf(2024)17
    • shiltemann17
    • Paul Zierep16
    • Wandrille Duchemin16
    • Cristóbal Gallardo15
    • Samaha, Georgina15
    • Sergio Martínez Cuesta15
    • Alexander Botzki14
    • Julia Jakiela14
    • Maria Doyle14
    • Mijke Jetten14
    • Monique Zahn14
    • Pratik Jagtap14
    • nekrut14
    • CRUK CI Bioinformatics Core13
    • Dave Clements13
    • Delphine Lariviere13
    • Donny Vrins13
    • James Johnson13
    • Katherine Do13
    • Personalized Health Informatics Group13
    • Wolfgang Maier13
    • Andrew Mason12
    • Celia van Gelder12
    • Jenny Drnevich @jenny12
    • Korbinian Bösl12
    • Marius van den Beek12
    • Melanie Föll12
    • Patricia Palagi12
    • Simon Andrews12
    • Simon Bray12
    • Anup Kumar11
    • Eija Korpelainen11
    • Khaled Jum'ah11
    • Mathieu Bourgey11
    • Pavankumar Videm11
    • Various11
    • Allegra Via10
    • Canadian Bioinformatics Workshops10
    • Daniel Blankenberg10
    • Federico Bianchini10
    • Fred Hutch Data Science Lab10
    • Martin Čech10
    • Paul Yorke10
    • Anika Erxleben9
    • David Wishart9
    • ELIXIR Estonia9
    • Jared Simpson9
    • Lucille Delisle9
    • Praveen Kumar9
    • allegra.via Via9
    • rstudio::conf(2022)9
    • Anne Pajon8
    • Avans Hogeschool8
    • Bastian Schiffthaler @bastian8
    • Boris Steipe8
    • Diana Pilvar8
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann21
    • Subina Mehta19
    • Pratik Jagtap17
    • Timothy J. Griffin13
    • Björn Grüning11
    • Helena Rasche9
    • Bérénice Batut8
    • Katherine Do7
    • Melanie Föll7
    • Nicola Soranzo4
    • Mallory Freeberg3
    • Christine Oger2
    • Emma Leith2
    • Paul Zierep2
    • Praveen Kumar2
    • Ray Sajulga2
    • Anthony Bretaudeau1
    • Cristóbal Gallardo1
    • Engy Nasr1
    • James Johnson1
    • Lucille Delisle1
    • Niall Beard1
    • Pavankumar Videm1
    • Show N_FILTERS more
    • Resource type
    • e-learning23
    • hands-on tutorial2
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets24
    • Associated Workflows17
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Hide materials with broken links
  • Hide archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Include archived: true

and Include broken links: true

and Authors: Subina Mehta

27 materials found
  • e-learning

    Neoantigen 1b: Non-Reference-Database-Generation

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 1a: Fusion-Database-Generation

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 4: Variant Annotation

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 3: PepQuery2 Verification

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 2: Database merge and FragPipe discovery

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 5b: IEDB binding Validated Neopeptides

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 5a: Predicting HLA Binding

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Clinical Metaproteomics 5: Data Interpretation

    • Beginner
    Metagenomics Microbial ecology Microbiome label-TMT11
  • e-learning

    Clinical Metaproteomics 4: Quantitation

    • Beginner
    Metagenomics Microbial ecology Microbiome label-TMT11
  • 1
  • 2
  • 3
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.