Training materials
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e-learning
Creating an Official Gene Set
• BeginnerGenomics Genome Annotation apollo2 gmod work-in-progress -
slides
Genome assembly quality control.
• BeginnerSequence assembly Assembly -
e-learning
Functional annotation of protein sequences
• BeginnerGenomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote -
e-learning
Masking repeats with RepeatMasker
• BeginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote -
e-learning
RNA-Seq analysis with AskOmics Interactive Tool
• BeginnerTranscriptomics Transcriptomics -
e-learning
De novo transcriptome assembly, annotation, and differential expression analysis
• BeginnerTranscriptomics Transcriptomics -
e-learning
Galaxy Interactive Tools
• BeginnerGalaxy Server administration ansible interactive-tools -
slides
Refining Genome Annotations with Apollo
• BeginnerGenomics Genome Annotation prokaryote -
slides
Prerequisites for building software/conda packages
• BeginnerSoftware engineering Development in Galaxy -
slides
Tool Shed: sharing Galaxy tools
• BeginnerSoftware engineering Development in Galaxy
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