Training materials
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ELIXIR TeSS
e-learning
Creation of the labs in the different Galaxy instances for your community
• BeginnerCoDex Community Galaxy Community Building SIG -
ELIXIR TeSS
e-learning
Annotate, prepare tests and publish Galaxy workflows in workflow registries
•• IntermediateFAIR Using Galaxy and Managing your Data workflows -
ELIXIR TeSS
e-learning
Optimizing DNA Sequences for Biological Functions using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and Machine Learning ai-ml elixir jupyter-notebook work-in-progress -
ELIXIR TeSS
e-learning
Pretraining a Large Language Model (LLM) from Scratch on DNA Sequences
•• IntermediateStatistics and probability Large Language Model Statistics and Machine Learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Fine-tuning a LLM for DNA Sequence Classification
•• IntermediateStatistics and probability Large Language Model Statistics and Machine Learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Predicting Mutation Impact with Zero-shot Learning using a pretrained DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and Machine Learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Generating Artificial Yeast DNA Sequences using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and Machine Learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Contributing to the Galaxy Training Network with GitHub
• BeginnerContributing to the Galaxy Training Material -
ELIXIR TeSS
e-learning
Preview the GTN website as you edit your training material
• BeginnerChoose your own Adventure CodeSpaces Command-line Contributing to the Galaxy Training Material GitPod -
ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome