- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Biological sequences16
- Community analysis16
- Environmental microbiology16
- Microbial ecology16
- Microbiome16
- Molecular community analysis16
- Sequence analysis16
- Sequence databases16
- Metagenomics14
- Shotgun metagenomics14
- Antimicrobial stewardship12
- Exomes12
- Genome annotation12
- Genomes12
- Genomics12
- Medical microbiology12
- Microbial genetics12
- Microbial physiology12
- Microbial surveillance12
- Microbiological surveillance12
- Microbiology12
- Molecular infection biology12
- Molecular microbiology12
- Personal genomics12
- Synthetic genomics12
- Viral genomics12
- Whole genomes12
- Taxonomy9
- Algorithms6
- Bayesian methods6
- Biostatistics6
- Computer programming6
- Data structures6
- De novo genome sequencing6
- Descriptive statistics6
- Gaussian processes6
- Genome sequencing6
- Inferential statistics6
- Markov processes6
- Multivariate statistics6
- Probabilistic graphical model6
- Probability6
- Programming languages6
- Software development6
- Software engineering6
- Statistics6
- Statistics and probability6
- WGS6
- Whole genome resequencing6
- Whole genome sequencing6
- Assembly5
- Comparative transcriptomics5
- Sequence assembly5
- Transcriptome5
- Transcriptomics5
- DNA metabarcoding4
- Environmental metabarcoding4
- Epidemiology4
- Metabarcoding4
- Public health4
- Public health and epidemiology4
- RNA metabarcoding4
- eDNA metabarcoding4
- eRNA metabarcoding4
- Biodiversity3
- Computational ecology3
- Ecoinformatics3
- Ecological informatics3
- Ecology3
- Ecosystem science3
- Mobile genetic elements3
- Transposons3
- AMR2
- Antibiotic resistance (ABR)2
- Antifungal resistance2
- Antimicrobial resistance2
- Antiprotozoal resistance2
- Antiviral resistance2
- DNA variation2
- Epigenomics2
- Extensive drug resistance (XDR)2
- Function analysis2
- Functional analysis2
- Genetic variation2
- Genomic variation2
- Metatranscriptomics2
- Multidrug resistance2
- Multiple drug resistance (MDR)2
- Multiresistance2
- Mutation2
- Pandrug resistance (PDR)2
- Polymorphism2
- Protein function analysis2
- Protein function prediction2
- Somatic mutations2
- Total drug resistance (TDR)2
- Communicable disease1
- Disease1
- Evolution1
- Evolutionary biology1
- Show N_FILTERS more
-
-
-
Tool
- Galaxy46
- FastQC10
- taxonomy_krona_chart7
- MultiQC6
- SAMtools6
- Cutadapt5
- Falco5
- Bandage4
- DeepTools4
- KrakenTools4
- MetaPhlAn4
- BEDTools3
- Bakta3
- BamTools3
- Bracken3
- JBrowse3
- NanoPlot3
- Newick Utilities3
- QUAST3
- fastp3
- ggplot23
- kraken23
- mothur3
- BCFtools2
- Bowtie 22
- FastTree2
- Flye2
- GraPhlAn2
- HUMAnN22
- Minimap22
- Recentrifuge2
- STAR2
- SortMeRNA2
- dRep2
- export2graphlan2
- humann2
- seqtk2
- tbl2gff32
- ABRicate1
- BLAST1
- BWA1
- Bowtie1
- Bwa-mem21
- CheckM1
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
- Combine Metaphlan and HUMAnN1
- CoverM1
- DESeq21
- FASTQE1
- FeatureCounts1
- Filtlong1
- FreeBayes1
- GEMINI1
- GOseq1
- ISEScan1
- Integron Finder1
- JBrowse 21
- Krona1
- MACS1
- MEGAHIT1
- MEME1
- MLST1
- Medaka1
- NCBI Datasets1
- NGSUtils1
- Nextclade1
- PPanGGOLiN1
- Peakachu1
- PlasmidFinder1
- Polypolish1
- R1
- RCAS1
- RSeQC1
- SCANPY1
- SRA Software Toolkit1
- TRANSIT1
- Trim Galore1
- Trimmomatic1
- UCSC Genome Browser Utilities1
- UMI-tools1
- bx-python1
- dada21
- metaspades1
- pangolin1
- pathview1
- phyloseq1
- pycoQC1
- scikit-learn1
- shovill1
- staramr1
- Show N_FILTERS more
-
-
-
Content provider
- GTN81
- Show N_FILTERS more
-
-
-
Keyword
- microgalaxy22
- Microbiome14
- Contributing to the Galaxy Training Material12
- Teaching and Hosting Galaxy training12
- elixir11
- work-in-progress7
- Genome Annotation6
- Statistics and machine learning6
- deutsch6
- español6
- italiano6
- metagenomics6
- train-the-trainers6
- Large Language Model5
- ai-ml5
- illumina5
- jupyter-notebook5
- Community4
- Galaxy Community Building4
- SIG4
- assembly4
- bacteria4
- 16S3
- Ecology3
- Foundations of Data Science3
- Sequence analysis3
- Transcriptomics3
- interactive-tools3
- metabarcoding3
- Assembly2
- ChIP-seq2
- CoDex2
- Development in Galaxy2
- Epigenetics2
- Introduction to Galaxy Analyses2
- Single Cell2
- Using Galaxy and Managing your Data2
- Variant Analysis2
- amr2
- biodiversity2
- cyoa2
- gmod2
- jbrowse12
- metatranscriptomics2
- nanopore2
- one-health2
- species populations EBV class2
- 10x1
- Choose your own Adventure1
- CodeSpaces1
- Command-line1
- EBV dataset1
- EBV workflow1
- Evolution1
- FAIR1
- GitPod1
- Heatmap1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- QC1
- R1
- beer1
- binning1
- bulk1
- citizen science1
- collections1
- covid191
- diversity1
- drosophila1
- essential genes1
- gbif1
- host-removal1
- modeling1
- preprocessing1
- rna-seq1
- species traits EBV class1
- taxonomic profiling1
- tnseq1
- virology1
- workflows1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner72
- Intermediate9
- Show N_FILTERS more
-
-
-
Target audience
- Students51
- Instructors28
- Galaxy Administrators2
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut
- Helena Rasche95
- Saskia Hiltemann38
- Björn Grüning28
- Anton Nekrutenko25
- Yvan Le Bras25
- The Carpentries24
- Subina Mehta22
- Fotis E. Psomopoulos21
- Bazante Sanders18
- Krzysztof Poterlowicz18
- Marie Josse18
- Wendi Bacon18
- Anthony Bretaudeau17
- Katarzyna Kamieniecka17
- Simon Gladman15
- Anne Fouilloux14
- Nicola Soranzo14
- Donny Vrins13
- Monique Zahn13
- Wolfgang Maier13
- James Johnson12
- Julia Jakiela12
- Katherine Do12
- Khaled Jum'ah12
- Mehmet Tekman12
- Paul Zierep12
- Simon Bray12
- Maria Doyle11
- Anup Kumar10
- Cristóbal Gallardo10
- Delphine Lariviere10
- Melanie Föll10
- Pavankumar Videm10
- Pratik Jagtap10
- Avans Hogeschool9
- Marius van den Beek9
- Nate Coraor9
- Diana Chiang Jurado8
- Timothy J. Griffin8
- Anika Erxleben7
- Daniel Blankenberg7
- Dave Clements7
- Florian Christoph Sigloch7
- Laura Cooper7
- Leonid Kostrykin7
- Lucille Delisle7
- Matthias Fahrner7
- Praveen Kumar7
- Robert Andrews7
- Allegra Via6
- Andrew Mason6
- Anna Syme6
- Branka Franicevic6
- Coline Royaux6
- Daniela Schneider6
- ELIXIR Goblet Train the Trainers6
- Emma Leith6
- Patricia Palagi6
- Philippe Rocca-Serra6
- Sara Morsy6
- Valentin Loux6
- Xenia Perez Sitja6
- Alex Ostrovsky5
- Beatriz Serrano-Solano5
- Christopher Barnett5
- Clemens Blank5
- Dechen Bhuming5
- Erwan Corre5
- Joachim Wolff5
- John Chilton5
- John Davis5
- Kellie Snow5
- Korneel Hens5
- Marisa Loach5
- Munazah Andrabi5
- Nadia Goué5
- Nick Juty5
- Raphael Mourad5
- Ray Sajulga5
- Riccardo Massei5
- Saskia Lawson-Tovey5
- Solenne Correard5
- Stéphanie Robin5
- Tristan Reynolds5
- Alexandre Cormier4
- Alireza Khanteymoori4
- Amirhossein Naghsh Nilchi4
- Anne Pajon4
- Gildas Le Corguillé4
- Helge Hecht4
- Hélène Chiapello4
- Jeremy Goecks4
- Junhao Qiu4
- Kaivan Kamali4
- Keiler Collier4
- Laura Leroi4
- Mallory Freeberg4
- Mira Kuntz4
- Morgan Howells4
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann71
- Bérénice Batut64
- Björn Grüning57
- Helena Rasche55
- Nicola Soranzo23
- Anthony Bretaudeau21
- Niall Beard19
- Cristóbal Gallardo16
- Martin Čech16
- Teresa Müller16
- Armin Dadras13
- Paul Zierep13
- Gildas Le Corguillé12
- Tristan Reynolds10
- Wendi Bacon10
- William Durand10
- Wolfgang Maier9
- Anup Kumar7
- Marie Josse7
- Deepti Varshney6
- Simon Bray6
- Clea Siguret5
- Hans-Rudolf Hotz5
- Maria Doyle5
- Mehmet Tekman5
- Nate Coraor5
- olisand5
- Florian Heyl4
- Pavankumar Videm4
- Solenne Correard4
- Wandrille Duchemin4
- Yvan Le Bras4
- Bazante Sanders3
- Bert Droesbeke3
- Daniela Schneider3
- Ekaterina Polkh3
- Engy Nasr3
- Keiler Collier3
- Lucille Delisle3
- Marisa Loach3
- Marius van den Beek3
- Miaomiao Zhou3
- Natalie Whitaker-Allen3
- Simon Gladman3
- Amirhossein Naghsh Nilchi2
- Anika Erxleben2
- Anna Syme2
- Anne Fouilloux2
- Christine Oger2
- Clemens Blank2
- Igor Makunin2
- Johan Gustafsson2
- Linelle Abueg2
- Martin Carrere2
- Mateusz Kuzak2
- Matthias Bernt2
- Michael Thang2
- Verena Moosmann2
- pimarin2
- Alexandre Cormier1
- Alireza Khanteymoori1
- Andrea Bagnacani1
- Beatriz Serrano-Solano1
- Cyril Monjeaud1
- Dave Clements1
- David López1
- Delphine Lariviere1
- Diana Chiang Jurado1
- Fidel Ramirez1
- Giuseppe Defazio1
- Graeme Tyson1
- Jasper Ouwerkerk1
- Joachim Wolff1
- Julia Jakiela1
- Leily Rabbani1
- Lisanna Paladin1
- Mateo Boudet1
- Matúš Kalaš1
- Melissa Burke1
- Natalie Kucher1
- Nils Mittler1
- Nuwan Goonasekera1
- Pablo Moreno1
- Peter van Heusden1
- Phil Reed1
- Polina Polunina1
- Renato Alves1
- Santino Faack1
- Siyu Chen1
- Sophia Hampe1
- Stéphanie Robin1
- Swathi Nataraj1
- Tarnima Omara1
- Vini Salazar1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning
- slides21
- hands-on tutorial9
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials