Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Antimicrobial stewardship3
    • De novo genome sequencing3
    • Epidemiology3
    • Exomes3
    • Genome annotation3
    • Genome sequencing3
    • Genomes3
    • Genomics3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Personal genomics3
    • Public health3
    • Public health and epidemiology3
    • Synthetic genomics3
    • Viral genomics3
    • WGS3
    • Whole genome resequencing3
    • Whole genome sequencing3
    • Whole genomes3
    • AMR2
    • Antibiotic resistance (ABR)2
    • Antifungal resistance2
    • Antimicrobial resistance2
    • Antiprotozoal resistance2
    • Antiviral resistance2
    • Assembly2
    • Extensive drug resistance (XDR)2
    • Multidrug resistance2
    • Multiple drug resistance (MDR)2
    • Multiresistance2
    • Pandrug resistance (PDR)2
    • Sequence assembly2
    • Total drug resistance (TDR)2
    • Biological sequences1
    • Communicable disease1
    • Infectious disease1
    • Sequence analysis1
    • Sequence databases1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • Bandage2
    • QUAST2
    • Bakta1
    • Bwa-mem21
    • Falco1
    • FastQC1
    • Filtlong1
    • Flye1
    • JBrowse1
    • NanoPlot1
    • Polypolish1
    • fastp1
    • shovill1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy3
    • Assembly2
    • amr2
    • assembly2
    • illumina2
    • Genome Annotation1
    • gmod1
    • jbrowse11
    • nanopore1
    • one-health1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bazante Sanders
    • Bérénice Batut40
    • Saskia Hiltemann22
    • Subina Mehta17
    • Mehmet Tekman13
    • Katherine Do12
    • Anne Fouilloux11
    • Anup Kumar11
    • Helena Rasche11
    • Maria Doyle11
    • Pavankumar Videm11
    • Anton Nekrutenko10
    • Björn Grüning10
    • Wendi Bacon10
    • Yvan Le Bras10
    • Anthony Bretaudeau9
    • James Johnson9
    • Simon Gladman9
    • Delphine Lariviere8
    • Kaivan Kamali8
    • Anika Erxleben7
    • Cristóbal Gallardo7
    • Julia Jakiela7
    • Nicola Soranzo7
    • Anna Syme6
    • Paul Zierep6
    • Wolfgang Maier6
    • Dechen Bhuming5
    • Erwan Corre5
    • Joachim Wolff5
    • Melanie Föll5
    • Pratik Jagtap5
    • Valentin Loux5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Clemens Blank4
    • Coline Royaux4
    • Daniel Blankenberg4
    • Dave Clements4
    • Diana Chiang Jurado4
    • Florian Heyl4
    • Hélène Chiapello4
    • Katarzyna Kamieniecka4
    • Khaled Jum'ah4
    • Krzysztof Poterlowicz4
    • Laura Leroi4
    • Mallory Freeberg4
    • Morgan Howells4
    • Stéphanie Robin4
    • Vivek Bhardwaj4
    • Alex Ostrovsky3
    • Belinda Phipson3
    • Daniela Schneider3
    • Emma Leith3
    • Engy Nasr3
    • Fidel Ramirez3
    • Jeremy Goecks3
    • Junhao Qiu3
    • Lucille Delisle3
    • Marisa Loach3
    • Mateo Boudet3
    • Mo Heydarian3
    • Mélanie Petera3
    • Paulo Cilas Morais Lyra Junior3
    • Polina Polunina3
    • Torsten Seemann3
    • Andrea Bagnacani2
    • Anne Pajon2
    • Anne Siegel2
    • Beatriz Serrano-Solano2
    • Camila Goclowski2
    • Chao Zhang2
    • Cristina Martins Rodrigues2
    • Deepti Varshney2
    • Dominik Brilhaus2
    • Ekaterina Polkh2
    • Esteban Perez-Wohlfeil2
    • Fabio Cumbo2
    • Friederike Dündar2
    • Gildas Le Corguillé2
    • Guillaume Gricourt2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Helge Hecht2
    • Ioana Popescu2
    • Jean-François Martin2
    • Jean-Loup Faulon2
    • Joan Hérisson2
    • Kenza Bazi-Kabbaj2
    • Kevin Frey2
    • Khai Van Dang2
    • Leily Rabbani2
    • Leonid Kostrykin2
    • Lisanna Paladin2
    • Martin Kuhl2
    • Matthias Fahrner2
    • Miguel Roncoroni2
    • Nadia Goué2
    • Olivier Dameron2
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau3
    • Bazante Sanders3
    • Björn Grüning3
    • Bérénice Batut3
    • Helena Rasche3
    • Miaomiao Zhou3
    • Saskia Hiltemann3
    • Tristan Reynolds3
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • pimarin2
    • Matúš Kalaš1
    • Nate Coraor1
    • Paul Zierep1
    • Teresa Müller1
    • Verena Moosmann1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets
    • Jupyter Notebook (with Solutions)11
    • Jupyter Notebook (without Solutions)11
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Competency level: Beginner

and Authors: Bazante Sanders

and Related resources: Associated Training Datasets

3 materials found
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • Beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.