Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Antimicrobial stewardship3
    • De novo genome sequencing3
    • Epidemiology3
    • Exomes3
    • Genome annotation3
    • Genome sequencing3
    • Genomes3
    • Genomics3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Personal genomics3
    • Public health3
    • Public health and epidemiology3
    • Synthetic genomics3
    • Viral genomics3
    • WGS3
    • Whole genome resequencing3
    • Whole genome sequencing3
    • Whole genomes3
    • AMR2
    • Antibiotic resistance (ABR)2
    • Antifungal resistance2
    • Antimicrobial resistance2
    • Antiprotozoal resistance2
    • Antiviral resistance2
    • Assembly2
    • Extensive drug resistance (XDR)2
    • Multidrug resistance2
    • Multiple drug resistance (MDR)2
    • Multiresistance2
    • Pandrug resistance (PDR)2
    • Sequence assembly2
    • Total drug resistance (TDR)2
    • Biological sequences1
    • Communicable disease1
    • Infectious disease1
    • Sequence analysis1
    • Sequence databases1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • Bandage2
    • QUAST2
    • Bakta1
    • Bwa-mem21
    • Falco1
    • FastQC1
    • Filtlong1
    • Flye1
    • JBrowse1
    • NanoPlot1
    • Polypolish1
    • fastp1
    • shovill1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy3
    • Assembly2
    • amr2
    • assembly2
    • illumina2
    • Genome Annotation1
    • gmod1
    • jbrowse11
    • nanopore1
    • one-health1
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bazante Sanders
    • Bérénice Batut46
    • Subina Mehta22
    • Yvan Le Bras22
    • Saskia Hiltemann19
    • Björn Grüning14
    • Helena Rasche14
    • Marie Josse14
    • Anne Fouilloux13
    • Anthony Bretaudeau13
    • Anton Nekrutenko13
    • Wolfgang Maier13
    • James Johnson12
    • Katherine Do12
    • Maria Doyle11
    • Mehmet Tekman11
    • Delphine Lariviere10
    • Melanie Föll10
    • Pavankumar Videm10
    • Pratik Jagtap10
    • Wendi Bacon10
    • Anup Kumar9
    • Cristóbal Gallardo9
    • Simon Bray9
    • Diana Chiang Jurado8
    • Timothy J. Griffin8
    • Julia Jakiela7
    • Leonid Kostrykin7
    • Matthias Fahrner7
    • Paul Zierep7
    • Praveen Kumar7
    • Simon Gladman7
    • Anika Erxleben6
    • Anna Syme6
    • Coline Royaux6
    • Daniel Blankenberg6
    • Dave Clements6
    • Emma Leith6
    • Nicola Soranzo6
    • Valentin Loux6
    • Beatriz Serrano-Solano5
    • Dechen Bhuming5
    • Erwan Corre5
    • Florian Christoph Sigloch5
    • Fotis E. Psomopoulos5
    • Ray Sajulga5
    • Riccardo Massei5
    • Stéphanie Robin5
    • Alex Ostrovsky4
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Clemens Blank4
    • Daniela Schneider4
    • Gildas Le Corguillé4
    • Helge Hecht4
    • Hélène Chiapello4
    • Joachim Wolff4
    • Kaivan Kamali4
    • Katarzyna Kamieniecka4
    • Khaled Jum'ah4
    • Krzysztof Poterlowicz4
    • Laura Leroi4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Marius van den Beek4
    • Nadia Goué4
    • Romane LIBOUBAN4
    • Vivek Bhardwaj4
    • Belinda Phipson3
    • Christopher Barnett3
    • Fidel Ramirez3
    • Florian Heyl3
    • Jeremy Goecks3
    • Junhao Qiu3
    • Marie Crane3
    • Marisa Loach3
    • Mo Heydarian3
    • Morgan Howells3
    • Mélanie Petera3
    • Paulo Cilas Morais Lyra Junior3
    • Polina Polunina3
    • Toby Hodges3
    • Workflow4Metabolomics core team3
    • Alyssa Pybus2
    • Anne Pajon2
    • Brandon Pickett2
    • Christoph Stritt2
    • Clea Siguret2
    • Daniela Brites2
    • David Christiany2
    • Deepti Varshney2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Engy Nasr2
    • Fabio Cumbo2
    • Florence Combes2
    • Friederike Dündar2
    • Galo A. Goig2
    • Hans-Rudolf Hotz2
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau3
    • Bazante Sanders3
    • Björn Grüning3
    • Bérénice Batut3
    • Helena Rasche3
    • Miaomiao Zhou3
    • Saskia Hiltemann3
    • Tristan Reynolds3
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • pimarin2
    • Matúš Kalaš1
    • Nate Coraor1
    • Paul Zierep1
    • Teresa Müller1
    • Verena Moosmann1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Authors: Bazante Sanders

and Resource type: e-learning

3 e-learning materials found
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • Beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.