Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly1
    • Biological sequences1
    • Community analysis1
    • Comparative transcriptomics1
    • DNA metabarcoding1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • Metabarcoding1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Molecular community analysis1
    • RNA metabarcoding1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Shotgun metagenomics1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • fastp
    • Galaxy9
    • MultiQC3
    • SAMtools3
    • Biopython2
    • DESeq22
    • Falco2
    • Salmon2
    • Targetfinder.org2
    • Trim Galore2
    • miRDeep22
    • BUSCO1
    • BamTools1
    • Bandage1
    • Bwa-mem21
    • Diamond1
    • FastQC1
    • GenomeScope 2.01
    • IsoformSwitchAnalyzeR1
    • JBrowse1
    • Merqury1
    • Minimap21
    • NanoPlot1
    • PfamScan1
    • RSeQC1
    • SCANPY1
    • STAR1
    • Smudgeplots1
    • StringTie1
    • Unicycler1
    • bx-python1
    • gfastats1
    • gffcompare1
    • gffread1
    • kraken21
    • pyGenomeTracks1
    • rnaQUAST1
    • seqtk1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • 16S1
    • Assembly1
    • Microbiome1
    • Transcriptomics1
    • covid191
    • metabarcoding1
    • microgalaxy1
    • nanopore1
    • plants1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Cristóbal Gallardo
    • Anton Nekrutenko3
    • Bérénice Batut3
    • Daniel Blankenberg2
    • Dave Clements2
    • Marius van den Beek2
    • Anna Syme1
    • Bazante Sanders1
    • Engy Nasr1
    • John Beliveau1
    • Paul Zierep1
    • Polina Polunina1
    • Rand Zoabi1
    • Siyu Chen1
    • Teresa Müller1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning3
    • Cristóbal Gallardo3
    • Helena Rasche2
    • Saskia Hiltemann2
    • Beatriz Serrano-Solano1
    • Bérénice Batut1
    • Deepti Varshney1
    • Lucille Delisle1
    • Nate Coraor1
    • Willem de Koning1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • slides2
    • e-learning1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: fastp

and Competency level: Beginner

and Authors: Cristóbal Gallardo

3 materials found
  • e-learning

    16S Microbial analysis with Nanopore data

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy nanopore …
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

    • Beginner
    Sequence assembly Assembly covid19
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.