Training materials
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ELIXIR TeSS
e-learning
Genome-wide alternative splicing analysis
••• AdvancedTranscriptomics Transcriptomics alternative splicing isoform switching -
ELIXIR TeSS
e-learning
16S Microbial analysis with Nanopore data
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy nanopore … -
ELIXIR TeSS
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
ELIXIR TeSS
slides
Identification of non-canonical ORFs and their potential biological function
• BeginnerTranscriptomics Transcriptomics -
ELIXIR TeSS
slides
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics -
ELIXIR TeSS
e-learning
Visualisation with Circos
•• IntermediateVisualisation -
ELIXIR TeSS
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• IntermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• IntermediateSequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics miRNA plants stress tolerance -
ELIXIR TeSS
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• BeginnerTranscriptomics 10x Single Cell paper-replication plants
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