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Tools: Galaxy

and Competency level: Beginner

and Authors: Delphine Lariviere

9 materials found
  • e-learning

    Decontamination of a genome assembly

    • Beginner
    Sequence assembly Genomics Biodiversity Assembly biodiversity
  • e-learning

    Assembly of the mitochondrial genome from PacBio HiFi reads

    • Beginner
    Sequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity
  • e-learning

    ERGA post-assembly QC

    • Beginner
    Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants
  • e-learning

    Essential genes detection with Transposon insertion sequencing

    • Beginner
    Genomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq
  • e-learning

    Making sense of a newly assembled genome

    • Beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Unicycler Assembly

    • Beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • e-learning

    Use Jupyter notebooks in Galaxy

    • Beginner
    Using Galaxy and Managing your Data
  • slides

    Essential genes detection with Transposon insertion sequencing

    • Beginner
    Genomics Genome Annotation bacteria essential genes tnseq
  • slides

    Unicycler Assembly

    • Beginner
    Sequence assembly Assembly prokaryote
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