Training materials
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e-learning
Quantitative Analysis of Histological Staining Using Color Deconvolution
• BeginnerImaging Bioimaging Histology Imaging Microscopy pathology -
e-learning
Where to start with bioimage analysis in Galaxy
• BeginnerImaging Bioimaging Histology Imaging Microscopy -
e-learning
OpenRefine Tutorial for researching cultural data
• BeginnerDigital Humanities -
e-learning
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
•• IntermediateImaging Conversion Imaging Multi-channel image Object feature extraction ROI selection -
e-learning
Using BioImage.IO models for image analysis in Galaxy
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
e-learning
Pseudobulk Analysis with Decoupler and EdgeR
• BeginnerSingle Cell pseudobulk transcriptomics -
e-learning
Tracking of mitochondria and capturing mitoflashes
•• IntermediateImaging Imaging Isolated object tracking Temporal analysis Time-lapse data -
e-learning
Clustering 3K PBMCs with Scanpy
• BeginnerTranscriptomics 10x Single Cell