Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics7
    • Transcriptome7
    • Transcriptomics7
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • Biological sequences1
    • Epigenomics1
    • Sequence analysis1
    • Sequence databases1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • FastQC5
    • Cutadapt4
    • MultiQC3
    • GOseq2
    • MAGeCK2
    • RSeQC2
    • SAMtools2
    • ggplot22
    • BEDTools1
    • DESeq21
    • DeepTools1
    • EGSEA1
    • FASTQE1
    • Falco1
    • FeatureCounts1
    • GOEnrichment1
    • HISAT21
    • NanoPlot1
    • R1
    • SeqCode1
    • Subread1
    • annotatemyids1
    • edgeR1
    • fgsea1
    • pathview1
    • pycoQC1
    • tidybulk1
    • Show N_FILTERS more
    • Content provider
    • GTN11
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics7
    • QC3
    • mouse3
    • Genome Annotation2
    • collections2
    • deutsch2
    • español2
    • italiano2
    • CRISPR1
    • Epigenetics1
    • Sequence analysis1
    • bulk1
    • cell line1
    • cyoa1
    • drosophila1
    • essential genes1
    • genome editing1
    • limma-voom1
    • rna-seq1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International11
    • Show N_FILTERS more
    • Target audience
    • Students11
    • Show N_FILTERS more
    • Author
    • Maria Doyle
    • Bérénice Batut44
    • Yvan Le Bras22
    • Saskia Hiltemann19
    • Subina Mehta17
    • Marie Josse14
    • Anne Fouilloux13
    • Mehmet Tekman13
    • Katherine Do12
    • Anton Nekrutenko11
    • Anup Kumar11
    • Helena Rasche11
    • Pavankumar Videm11
    • Simon Gladman11
    • Björn Grüning10
    • Wendi Bacon10
    • Cristóbal Gallardo9
    • Delphine Lariviere9
    • James Johnson9
    • Kaivan Kamali8
    • Anthony Bretaudeau7
    • Julia Jakiela7
    • Nicola Soranzo7
    • Wolfgang Maier7
    • Anika Erxleben6
    • Anna Syme6
    • Coline Royaux6
    • Dave Clements6
    • Paul Zierep6
    • Valentin Loux6
    • Daniel Blankenberg5
    • Dechen Bhuming5
    • Erwan Corre5
    • Joachim Wolff5
    • Melanie Föll5
    • Pratik Jagtap5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Beatriz Serrano-Solano4
    • Clemens Blank4
    • Diana Chiang Jurado4
    • Florian Heyl4
    • Hélène Chiapello4
    • Katarzyna Kamieniecka4
    • Krzysztof Poterlowicz4
    • Laura Leroi4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Stéphanie Robin4
    • Vivek Bhardwaj4
    • Alex Ostrovsky3
    • Bazante Sanders3
    • Belinda Phipson3
    • Daniela Schneider3
    • Emma Leith3
    • Engy Nasr3
    • Fidel Ramirez3
    • Gildas Le Corguillé3
    • Jeremy Goecks3
    • Junhao Qiu3
    • Khaled Jum'ah3
    • Leonid Kostrykin3
    • Marisa Loach3
    • Mo Heydarian3
    • Morgan Howells3
    • Mélanie Petera3
    • Paulo Cilas Morais Lyra Junior3
    • Polina Polunina3
    • Simon Bray3
    • Torsten Seemann3
    • Anne Pajon2
    • Chao Zhang2
    • David Christiany2
    • Deepti Varshney2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Esteban Perez-Wohlfeil2
    • Florence Combes2
    • Florian Christoph Sigloch2
    • Fotis E. Psomopoulos2
    • Friederike Dündar2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Helge Hecht2
    • Jean-François Martin2
    • Jon Trow2
    • Khai Van Dang2
    • Leily Rabbani2
    • Lisanna Paladin2
    • Marius van den Beek2
    • Matthias Fahrner2
    • Miguel Roncoroni2
    • Nadia Goué2
    • Olivier Norvez2
    • Pauline Seguineau2
    • Praveen Kumar2
    • Rand Zoabi2
    • Ray Sajulga2
    • Riccardo Massei2
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche11
    • Björn Grüning10
    • Saskia Hiltemann9
    • Nicola Soranzo8
    • Maria Doyle5
    • Bérénice Batut3
    • Gildas Le Corguillé3
    • Lucille Delisle3
    • Anika Erxleben2
    • Anthony Bretaudeau2
    • Armin Dadras2
    • Cristóbal Gallardo2
    • Hans-Rudolf Hotz2
    • Mehmet Tekman2
    • Simon Bray2
    • Teresa Müller2
    • William Durand2
    • Wolfgang Maier2
    • Alexandre Cormier1
    • Amirhossein Naghsh Nilchi1
    • Anne Fouilloux1
    • Anup Kumar1
    • Clea Siguret1
    • Clemens Blank1
    • Ekaterina Polkh1
    • Florian Heyl1
    • Graeme Tyson1
    • IGC Bioinformatics Unit1
    • Marius van den Beek1
    • Martin Čech1
    • Mateo Boudet1
    • Matthias Bernt1
    • Natalie Kucher1
    • Niall Beard1
    • Pavankumar Videm1
    • Swathi Nataraj1
    • Tristan Reynolds1
    • Xavier Garnier1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning10
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets11
    • Associated Workflows11
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Competency level: Beginner

and Authors: Maria Doyle

11 materials found
  • e-learning

    CRISPR screen analysis

    • Beginner
    Genomics CRISPR Genome Annotation cell line essential genes genome editing
  • e-learning

    ATAC-Seq data analysis

    • Beginner
    Epigenomics Epigenetics
  • e-learning

    Visualization of RNA-Seq results with Volcano Plot

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    3: RNA-seq genes to pathways

    • Beginner
    Transcriptomics Transcriptomics mouse
  • e-learning

    GO Enrichment Analysis

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    2: RNA-seq counts to genes

    • Beginner
    Transcriptomics QC Transcriptomics limma-voom mouse
  • e-learning

    1: RNA-Seq reads to counts

    • Beginner
    Transcriptomics QC Transcriptomics collections mouse
  • e-learning

    Visualization of RNA-Seq results with heatmap2

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Reference-based RNA-Seq data analysis

    • Beginner
    Transcriptomics QC Transcriptomics bulk collections cyoa deutsch drosophila español italiano …
  • slides

    Introduction to CRISPR screen analysis

    • Beginner
    Genomics Genome Annotation
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.