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Competency level: Beginner

and Authors: Mehmet Tekman

15 materials found
  • e-learning

    Inferring single cell trajectories with Scanpy

    • Beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Comparing inferred cell compositions using MuSiC deconvolution

    • Beginner
    Single Cell transcriptomics
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • Beginner
    Single Cell data management transcriptomics
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • Beginner
    Single Cell data management
  • e-learning

    Inferring single cell trajectories with Scanpy (Python)

    • Beginner
    Transcriptomics MIGHTS Single Cell jupyter-notebook paper-replication
  • e-learning

    Pre-processing of 10X Single-Cell RNA Datasets

    • Beginner
    Transcriptomics 10x Single Cell
  • e-learning

    Pre-processing of Single-Cell RNA Data

    • Beginner
    Transcriptomics Single Cell work-in-progress
  • e-learning

    Analysis of plant scRNA-Seq Data with Scanpy

    • Beginner
    Transcriptomics Single Cell paper-replication plants
  • e-learning

    Clustering 3K PBMCs with Scanpy

    • Beginner
    Transcriptomics 10x Single Cell
  • e-learning

    Downstream Single-cell RNA analysis with RaceID

    • Beginner
    Transcriptomics Single Cell work-in-progress
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