Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Community analysis2
    • Environmental microbiology2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • Shotgun metagenomics2
    • Assembly1
    • Bayesian methods1
    • Biological sequences1
    • Biostatistics1
    • DNA variation1
    • Descriptive statistics1
    • Gaussian processes1
    • Genetic variation1
    • Genomic variation1
    • Inferential statistics1
    • Markov processes1
    • Multivariate statistics1
    • Mutation1
    • Polymorphism1
    • Probabilistic graphical model1
    • Probability1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Somatic mutations1
    • Statistics1
    • Statistics and probability1
    • Taxonomy1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • FastQC2
    • BamTools1
    • Bandage1
    • Bowtie 21
    • CoverM1
    • Cutadapt1
    • KrakenTools1
    • MEGAHIT1
    • NGSUtils1
    • QUAST1
    • fastp1
    • ggplot21
    • kraken21
    • metaspades1
    • seqtk1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN4
    • Show N_FILTERS more
    • Keyword
    • Microbiome2
    • metagenomics2
    • microgalaxy2
    • DMS1
    • MAVE1
    • Statistics and machine learning1
    • Variant Analysis1
    • assembly1
    • beer1
    • citizen science1
    • clinical genomics1
    • functional genomics1
    • nanopore1
    • variant effect1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Polina Polunina
    • Bérénice Batut44
    • Yvan Le Bras23
    • Saskia Hiltemann19
    • Subina Mehta17
    • Marie Josse14
    • Anne Fouilloux13
    • Mehmet Tekman13
    • Katherine Do12
    • Anton Nekrutenko11
    • Anup Kumar11
    • Helena Rasche11
    • Maria Doyle11
    • Pavankumar Videm11
    • Simon Gladman11
    • Björn Grüning10
    • Wendi Bacon10
    • Cristóbal Gallardo9
    • Delphine Lariviere9
    • James Johnson9
    • Kaivan Kamali8
    • Anthony Bretaudeau7
    • Julia Jakiela7
    • Nicola Soranzo7
    • Wolfgang Maier7
    • Anika Erxleben6
    • Anna Syme6
    • Coline Royaux6
    • Dave Clements6
    • Paul Zierep6
    • Valentin Loux6
    • Daniel Blankenberg5
    • Dechen Bhuming5
    • Diana Chiang Jurado5
    • Erwan Corre5
    • Joachim Wolff5
    • Melanie Föll5
    • Pratik Jagtap5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Beatriz Serrano-Solano4
    • Clemens Blank4
    • Florian Heyl4
    • Hélène Chiapello4
    • Katarzyna Kamieniecka4
    • Krzysztof Poterlowicz4
    • Laura Leroi4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Marisa Loach4
    • Stéphanie Robin4
    • Vivek Bhardwaj4
    • Alex Ostrovsky3
    • Bazante Sanders3
    • Belinda Phipson3
    • Daniela Schneider3
    • Emma Leith3
    • Engy Nasr3
    • Fidel Ramirez3
    • Gildas Le Corguillé3
    • Jeremy Goecks3
    • Junhao Qiu3
    • Khaled Jum'ah3
    • Leonid Kostrykin3
    • Mo Heydarian3
    • Morgan Howells3
    • Mélanie Petera3
    • Paulo Cilas Morais Lyra Junior3
    • Simon Bray3
    • Torsten Seemann3
    • Anne Pajon2
    • Arthur Barreau2
    • Chao Zhang2
    • David Christiany2
    • Deepti Varshney2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Esteban Perez-Wohlfeil2
    • Florence Combes2
    • Florian Christoph Sigloch2
    • Fotis E. Psomopoulos2
    • Friederike Dündar2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Helge Hecht2
    • Jean-François Martin2
    • Jon Trow2
    • Khai Van Dang2
    • Leily Rabbani2
    • Lisanna Paladin2
    • Marius van den Beek2
    • Matthias Fahrner2
    • Miguel Roncoroni2
    • Nadia Goué2
    • Nadine Le Bris2
    • Olivier Norvez2
    • Pauline Seguineau2
    • Praveen Kumar2
    • Rand Zoabi2
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning2
    • Bérénice Batut2
    • Helena Rasche2
    • Saskia Hiltemann2
    • Amirhossein Naghsh Nilchi1
    • Cristóbal Gallardo1
    • Mohammad Joudy1
    • Natalie Whitaker-Allen1
    • Nuwan Goonasekera1
    • Paul Zierep1
    • Polina Polunina1
    • Siyu Chen1
    • Teresa Müller1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Competency level: Beginner

and Authors: Polina Polunina

and Tools: Galaxy

4 materials found
  • ELIXIR TeSS

    e-learning

    Calculating CHEK2 variant effect scores from MAVE data with CountESS

    • Beginner
    Genetic variation DMS MAVE Variant Analysis clinical genomics functional genomics variant effect
  • ELIXIR TeSS

    e-learning

    Prepare Data from CbioPortal for Flexynesis Integration

    • Beginner
    Statistics and probability Statistics and machine learning
  • ELIXIR TeSS

    e-learning

    Identification of the micro-organisms in a beer using Nanopore sequencing

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
  • ELIXIR TeSS

    e-learning

    Assembly of metagenomic sequencing data

    • Beginner
    Metagenomics Sequence assembly Microbial ecology Microbiome assembly metagenomics microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.