Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Diffraction experiment5
    • Imaging5
    • Microscopy5
    • Microscopy imaging5
    • Optical super resolution microscopy5
    • Photonic force microscopy5
    • Photonic microscopy5
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • Galaxy Image Analysis4
    • scikit-image3
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • Imaging5
    • Image segmentation3
    • Overlay3
    • 3D image1
    • Conversion1
    • Data handling1
    • Data management1
    • Data sharing1
    • Deep learning1
    • IDR dataset1
    • Image annotation1
    • Multi-channel image1
    • Object counting1
    • Parameter optimisation1
    • ROI selection1
    • Rasterisation1
    • Spot detection1
    • Tessellation1
    • Validation1
    • Volume rendering1
    • Show N_FILTERS more
    • Competency level
    • Intermediate3
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Riccardo Massei
    • Helena Rasche94
    • Bérénice Batut81
    • Saskia Hiltemann38
    • Björn Grüning28
    • Anton Nekrutenko25
    • Yvan Le Bras24
    • The Carpentries23
    • Subina Mehta22
    • Fotis E. Psomopoulos21
    • Bazante Sanders18
    • Marie Josse18
    • Wendi Bacon18
    • Anthony Bretaudeau17
    • Katarzyna Kamieniecka17
    • Krzysztof Poterlowicz17
    • Simon Gladman15
    • Nicola Soranzo14
    • Donny Vrins13
    • Monique Zahn13
    • Wolfgang Maier13
    • Anne Fouilloux12
    • James Johnson12
    • Julia Jakiela12
    • Katherine Do12
    • Mehmet Tekman12
    • Paul Zierep12
    • Simon Bray12
    • Khaled Jum'ah11
    • Maria Doyle11
    • Cristóbal Gallardo10
    • Delphine Lariviere10
    • Melanie Föll10
    • Pavankumar Videm10
    • Pratik Jagtap10
    • Anup Kumar9
    • Marius van den Beek9
    • Nate Coraor9
    • Avans Hogeschool8
    • Diana Chiang Jurado8
    • Timothy J. Griffin8
    • Anika Erxleben7
    • Daniel Blankenberg7
    • Dave Clements7
    • Florian Christoph Sigloch7
    • Laura Cooper7
    • Leonid Kostrykin7
    • Lucille Delisle7
    • Matthias Fahrner7
    • Praveen Kumar7
    • Robert Andrews7
    • Allegra Via6
    • Andrew Mason6
    • Anna Syme6
    • Branka Franicevic6
    • Coline Royaux6
    • ELIXIR Goblet Train the Trainers6
    • Emma Leith6
    • Patricia Palagi6
    • Philippe Rocca-Serra6
    • Sara Morsy6
    • Valentin Loux6
    • Xenia Perez Sitja6
    • Alex Ostrovsky5
    • Beatriz Serrano-Solano5
    • Christopher Barnett5
    • Clemens Blank5
    • Dechen Bhuming5
    • Erwan Corre5
    • Joachim Wolff5
    • John Chilton5
    • John Davis5
    • Kellie Snow5
    • Korneel Hens5
    • Munazah Andrabi5
    • Nadia Goué5
    • Nick Juty5
    • Raphael Mourad5
    • Ray Sajulga5
    • Saskia Lawson-Tovey5
    • Solenne Correard5
    • Stéphanie Robin5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Anne Pajon4
    • Daniela Schneider4
    • Gildas Le Corguillé4
    • Helge Hecht4
    • Hélène Chiapello4
    • Kaivan Kamali4
    • Keiler Collier4
    • Laura Leroi4
    • Mallory Freeberg4
    • Marisa Loach4
    • Mira Kuntz4
    • Morgan Howells4
    • Romane LIBOUBAN4
    • Simone Leo4
    • Tristan Reynolds4
    • Show N_FILTERS more
    • Contributor
    • Beatriz Serrano-Solano5
    • Leonid Kostrykin5
    • Saskia Hiltemann5
    • Björn Grüning4
    • Riccardo Massei4
    • Armin Dadras1
    • Daniel Franco Barranco1
    • Diana Chiang Jurado1
    • Even Moa Myklebust1
    • Maria Arrate Munoz Barrutia1
    • Martin Čech1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows5
    • Associated Training Datasets3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Hide disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Authors: Riccardo Massei

and Resource type: e-learning

and Include disabled: true

5 e-learning materials found
  • e-learning

    Execute a BiaPy workflow in Galaxy

    •• Intermediate
    Imaging 3D image Conversion Deep learning Image annotation Image segmentation Imaging Overlay Volume rendering
  • e-learning

    Voronoi segmentation

    •• Intermediate
    Imaging Image segmentation Imaging Multi-channel image Object counting Overlay Tessellation
  • e-learning

    Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy

    • Beginner
    Imaging Image segmentation Imaging Parameter optimisation Validation
  • e-learning

    Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines

    • Beginner
    Imaging IDR dataset Imaging Overlay Rasterisation Spot detection
  • e-learning

    Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy

    •• Intermediate
    Imaging Data handling Data management Data sharing Imaging ROI selection
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.