- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
-
-
-
Scientific topic
- Algorithms11
- Computer programming11
- Data structures11
- Metagenomics11
- Programming languages11
- Shotgun metagenomics11
- Software development11
- Software engineering11
- Biological sequences8
- Community analysis8
- Environmental microbiology8
- Microbial ecology8
- Microbiome8
- Molecular community analysis8
- Sequence analysis8
- Sequence databases8
- Taxonomy5
- DNA metabarcoding3
- Environmental metabarcoding3
- Metabarcoding3
- RNA metabarcoding3
- eDNA metabarcoding3
- eRNA metabarcoding3
- Function analysis2
- Functional analysis2
- Metatranscriptomics2
- Protein function analysis2
- Protein function prediction2
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antimicrobial stewardship1
- Antiprotozoal resistance1
- Antiviral resistance1
- Assembly1
- Communicable disease1
- Comparative transcriptomics1
- DNA variation1
- Diffraction experiment1
- Epidemiology1
- Extensive drug resistance (XDR)1
- Genetic variation1
- Genomic variation1
- Imaging1
- Infectious disease1
- Medical microbiology1
- Metagenomic sequencing1
- Microbial genetics1
- Microbial physiology1
- Microbial surveillance1
- Microbiological surveillance1
- Microbiology1
- Microscopy1
- Microscopy imaging1
- Molecular infection biology1
- Molecular microbiology1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Mutation1
- Optical super resolution microscopy1
- Pandrug resistance (PDR)1
- Photonic force microscopy1
- Photonic microscopy1
- Polymorphism1
- Public health1
- Public health and epidemiology1
- Sequence assembly1
- Shotgun metagenomic sequencing1
- Somatic mutations1
- Total drug resistance (TDR)1
- Transcriptome1
- Transcriptomics1
- Transmissible disease1
- Show N_FILTERS more
-
-
-
Tool
- Galaxy24
- FastQC5
- taxonomy_krona_chart5
- Cutadapt4
- MetaPhlAn4
- MultiQC4
- GraPhlAn3
- SortMeRNA3
- export2graphlan3
- ggplot23
- humann3
- mothur3
- Combine Metaphlan and HUMAnN2
- Galactic Circos2
- HUMAnN22
- Newick Utilities2
- BCFtools1
- BEDTools1
- BamTools1
- Bandage1
- EGA1
- FASTX-Toolkit1
- FeatureCounts1
- GEMINI1
- GOseq1
- Galaxy Image Analysis1
- HISAT21
- JBrowse1
- Krona1
- MAFFT1
- NanoPlot1
- RSeQC1
- Racon1
- SAMtools1
- SPAdes1
- SRA Software Toolkit1
- Unicycler1
- VelvetOptimiser1
- annotatemyids1
- ete1
- iqtree1
- limma1
- miniasm1
- scikit-image1
- seqtk1
- staramr1
- trimAl1
- Show N_FILTERS more
-
-
-
Content provider
- GTN64
- Show N_FILTERS more
-
-
-
Keyword
- Contributing to the Galaxy Training Material8
- Microbiome8
- Development in Galaxy7
- metagenomics7
- Introduction to Galaxy Analyses6
- microgalaxy6
- Galaxy Server Administration5
- Visualisation5
- cyoa5
- metatranscriptomics4
- Foundations of Data Science3
- Teaching and Hosting Galaxy Training3
- ansible3
- galaxy-intro3
- 16S2
- Sequence Analysis2
- Using Galaxy and Managing your Data2
- amr2
- assembly2
- fair2
- git-gat2
- metabarcoding2
- nanopore2
- plants2
- plasmids2
- Assembly1
- Choose your own Adventure1
- CodeSpaces1
- Command-line1
- Conversion1
- FAIR Data, Workflows, and Research1
- Fluorescence microscopy1
- Galaxy Community Building1
- GitPod1
- Image segmentation1
- Image thresholding1
- Imaging1
- Object counting1
- Overlay1
- Transcriptomics1
- Variant Analysis1
- bulk1
- data stewardship1
- gmod1
- jbrowse11
- jobs1
- json1
- jupyter-notebook1
- rna-seq1
- sql1
- storage1
- training1
- viz1
- workflows1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner52
- Not specified7
- Intermediate4
- Advanced1
- Show N_FILTERS more
-
-
-
Licence
- Creative Commons Attribution 4.0 International64
- Show N_FILTERS more
-
-
-
Target audience
- Students40
- Galaxy Administrators12
- Instructors12
- Show N_FILTERS more
-
-
-
Author
- Saskia Hiltemann
- Helena Rasche115
- Bérénice Batut93
- Björn Grüning43
- Simon Gladman32
- Yvan Le Bras27
- Anthony Bretaudeau26
- Subina Mehta26
- Anton Nekrutenko25
- Nate Coraor25
- Fotis E. Psomopoulos21
- Nicola Soranzo21
- The Carpentries21
- Anne Fouilloux20
- Wendi Bacon17
- Marie Josse16
- Paul Zierep15
- Pratik Jagtap14
- Dave Clements13
- Katarzyna Kamieniecka13
- Krzysztof Poterlowicz13
- Mehmet Tekman13
- Bazante Sanders12
- Delphine Lariviere12
- James Johnson12
- Julia Jakiela12
- Katherine Do12
- Simon Bray12
- Wolfgang Maier12
- Cristóbal Gallardo11
- Maria Doyle11
- Marius van den Beek11
- Anup Kumar10
- Daniel Blankenberg10
- Martin Čech10
- Melanie Föll10
- Avans Hogeschool9
- John Chilton9
- Praveen Kumar9
- Anika Erxleben8
- Anne Pajon8
- Diana Chiang Jurado8
- Emma Leith8
- Lucille Delisle8
- Pavankumar Videm8
- Stéphanie Robin8
- Timothy J. Griffin8
- Alexandre Cormier7
- Anna Syme7
- Christopher Barnett7
- Donny Vrins7
- Erwan Corre7
- Florian Christoph Sigloch7
- Joachim Wolff7
- Kaivan Kamali7
- Khaled Jum'ah7
- Laura Leroi7
- Ray Sajulga7
- Alex Ostrovsky6
- Allegra Via6
- Clemens Blank6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Gildas Le Corguillé6
- Jeremy Goecks6
- Junhao Qiu6
- Leonid Kostrykin6
- Matthias Fahrner6
- Michael Charleston6
- Morgan Howells6
- Nadia Goué6
- Patricia Palagi6
- Paulo Cilas Morais Lyra Junior6
- Solenne Correard6
- Daniela Schneider5
- Dechen Bhuming5
- John Davis5
- Riccardo Massei5
- Alireza Khanteymoori4
- Andrea Bagnacani4
- Beatriz Serrano-Solano4
- Cyril Monjeaud4
- Enis Afgan4
- Florian Heyl4
- Keiler Collier4
- Khai Van Dang4
- Mallory Freeberg4
- Marisa Loach4
- Mateo Boudet4
- Mira Kuntz4
- Mélanie Petera4
- Simone Leo4
- Vivek Bhardwaj4
- Youri Hoogstrate4
- Alyssa Pybus3
- Dannon Baker3
- Engy Nasr3
- Fidel Ramirez3
- Gianmauro Cuccuru3
- Guillaume Gricourt3
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann
- Helena Rasche51
- Björn Grüning42
- Bérénice Batut38
- Nicola Soranzo30
- Niall Beard18
- Anthony Bretaudeau15
- Martin Čech15
- Cristóbal Gallardo14
- William Durand13
- Gildas Le Corguillé11
- Armin Dadras6
- Dave Clements6
- Nate Coraor6
- Simon Gladman6
- Wendi Bacon6
- Marius van den Beek5
- Wolfgang Maier5
- Daniela Schneider4
- David López4
- Lucille Delisle4
- Subina Mehta4
- Teresa Müller4
- Anne Fouilloux3
- Beatriz Serrano-Solano3
- Michele Maroni3
- Nadia Goué3
- Pavankumar Videm3
- Pratik Jagtap3
- Simon Bray3
- Tristan Reynolds3
- Andrea Bagnacani2
- Anna Syme2
- Bert Droesbeke2
- Christine Oger2
- Dannon Baker2
- Emma Leith2
- Engy Nasr2
- Gianmauro Cuccuru2
- Igor Makunin2
- Jennifer Hillman-Jackson2
- John Chilton2
- Maria Doyle2
- Matthias Bernt2
- Mehmet Tekman2
- Michael Thang2
- Mira Kuntz2
- Paul Zierep2
- Praveen Kumar2
- Ray Sajulga2
- Willem de Koning2
- Youri Hoogstrate2
- Alex Ostrovsky1
- Anne Pajon1
- Anton Nekrutenko1
- Anup Kumar1
- Aysam Guerler1
- Christopher Barnett1
- Donny Vrins1
- Fotis E. Psomopoulos1
- Jasper Ouwerkerk1
- John Davis1
- José Manuel Domínguez1
- Leonid Kostrykin1
- Linelle Abueg1
- Marie Josse1
- Matti Hoch1
- Mélanie Petera1
- Nils Mittler1
- Olha Nahorna1
- Paul De Geest1
- Peter van Heusden1
- Sanjay Kumar Srikakulam1
- Scott Cain1
- Sofoklis Keisaris1
- Stéphanie Robin1
- Thomas Wollmann1
- Vlad Visan1
- Yongbin Li1
- Yvan Le Bras1
- mmiladi1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning38
- slides20
- hands-on tutorial6
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets25
- Associated Workflows22
- Jupyter Notebook (with Solutions)1
- Jupyter Notebook (without Solutions)1
- Show N_FILTERS more
-
-
-
Collection
- ELIXIR Federated Human Data Community1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials