- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Algorithms98
- Computer programming98
- Data structures98
- Programming languages98
- Software development98
- Software engineering98
- Comparative transcriptomics50
- Exomes50
- Genome annotation50
- Genomes50
- Genomics50
- Personal genomics50
- Synthetic genomics50
- Transcriptome50
- Transcriptomics50
- Viral genomics50
- Whole genomes50
- Bayesian methods47
- Biostatistics47
- Descriptive statistics47
- Gaussian processes47
- Inferential statistics47
- Markov processes47
- Multivariate statistics47
- Probabilistic graphical model47
- Probability47
- Statistics47
- Statistics and probability47
- Biodiversity41
- Bottom-up proteomics38
- Discovery proteomics38
- MS-based targeted proteomics38
- MS-based untargeted proteomics38
- Metagenomics38
- Metaproteomics38
- Peptide identification38
- Protein and peptide identification38
- Proteomics38
- Quantitative proteomics38
- Shotgun metagenomics38
- Targeted proteomics38
- Top-down proteomics38
- Biological sequences35
- Sequence analysis35
- Sequence databases35
- Assembly34
- Sequence assembly34
- Community analysis33
- Environmental microbiology33
- Microbial ecology33
- Microbiome33
- Molecular community analysis33
- Computational ecology30
- Ecoinformatics30
- Ecological informatics30
- Ecology30
- Ecosystem science30
- Diffraction experiment26
- Imaging26
- Microscopy26
- Microscopy imaging26
- Optical super resolution microscopy26
- Photonic force microscopy26
- Photonic microscopy26
- Antimicrobial stewardship22
- Medical microbiology22
- Microbial genetics22
- Microbial physiology22
- Microbial surveillance22
- Microbiological surveillance22
- Microbiology22
- Molecular infection biology22
- Molecular microbiology22
- DNA variation20
- Genetic variation20
- Genomic variation20
- Mutation20
- Polymorphism20
- Somatic mutations20
- Taxonomy17
- Epigenomics14
- Exometabolomics12
- LC-MS-based metabolomics12
- MS-based metabolomics12
- MS-based targeted metabolomics12
- MS-based untargeted metabolomics12
- Mass spectrometry-based metabolomics12
- Metabolites12
- Metabolome12
- Metabolomics12
- Metabonomics12
- NMR-based metabolomics12
- Evolution10
- Evolutionary biology10
- Computational chemistry9
- DNA metabarcoding7
- Environmental metabarcoding7
- Metabarcoding7
- RNA metabarcoding7
- eDNA metabarcoding7
- Show N_FILTERS more
-
-
-
Tool
- Galaxy370
- FastQC35
- SAMtools26
- MultiQC25
- BWA21
- BEDTools16
- fastp16
- scikit-learn16
- JBrowse15
- SCANPY15
- Falco14
- DeepTools13
- BLAST12
- Cutadapt12
- QUAST12
- ggplot212
- BUSCO11
- Galaxy Image Analysis11
- GEMINI10
- STAR10
- scikit-image10
- taxonomy_krona_chart10
- FreeBayes9
- NanoPlot9
- Trimmomatic9
- Bandage8
- FASTX-Toolkit8
- BCFtools7
- BamTools7
- Biopython7
- HISAT27
- msConvert7
- seqtk7
- Flye6
- MAFFT6
- MaxQuant6
- Open Babel6
- RStudio6
- Trim Galore6
- Unicycler6
- Workflow4Metabolomics6
- gffread6
- Galactic Circos5
- MetaPhlAn5
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- RSeQC5
- SRA Software Toolkit5
- StringTie5
- anndata5
- annotatemyids5
- compute_sequence_length5
- gffcompare5
- kraken25
- xcms5
- Bowtie 24
- Bwa-mem24
- CellProfiler4
- DESeq24
- Diamond4
- GOseq4
- KrakenTools4
- MACS4
- MSstats4
- Merqury4
- Newick Utilities4
- Salmon4
- The Protein Data Bank (PDB)4
- UniProt4
- bx-python4
- mothur4
- snpEff4
- Apollo3
- Bakta3
- Bracken3
- Cardinal3
- Clustal 1.8 (Clustal W, Clustal X)3
- DropletUtils3
- FastTree3
- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- OMArk3
- QualiMap3
- RDKit3
- SeqCode3
- SortMeRNA3
- Stacks3
- UCSC Genome Browser Utilities3
- Vcflib3
- bed to protein map3
- customProDB3
- dRep3
- export2graphlan3
- gfastats3
- humann3
- iqtree3
- lofreq3
- pyGenomeTracks3
- snippy3
- Show N_FILTERS more
-
-
-
Content provider
- GTN
- Glittr.org840
- European Bioinformatics Institute (EBI)497
- Bioconductor242
- IFB French Institute of Bioinformatics149
- ERGA Knowledge Hub128
- SIB Swiss Institute of Bioinformatics114
- GOBLET110
- Australian BioCommons90
- ELIXIR73
- Bioinformatics Visualization72
- ELXIR-UK DaSH70
- Software Carpentry70
- Bioinformatics and Biomathematics Training Hub62
- NGS Registry60
- DTLS - Dutch Techcentre For Life Sciences41
- VIB Training & Conferences38
- de.NBI36
- Data Carpentry34
- Khan Academy Statistics32
- BY-COVID31
- VIB Bioinformatics Core29
- Canadian Bioinformatics Workshops26
- Coding for Reproducible Research (CfRR)19
- Coursera19
- VBCF BioComp19
- ELIXIR Portugal18
- CINECA PROJECT17
- CSC - IT Center for Science12
- ELIXIR Estonia12
- PerMedCoE12
- NBIS11
- VHP4Safety10
- eNanoMapper10
- Bioschemas9
- EMBL-ABR9
- NanoCommons9
- Barcelona Supercomputing Center (BSC)8
- Department of Bioinformatics - BiGCaT, Maastricht University8
- ELIXIR Norway8
- Genome 3D8
- InterMine8
- Centre for Genomic Regulation (CRG)7
- BioData.pt6
- Data Steward team Ghent University6
- ELIXIR Luxembourg6
- ELIXIR-SI eLearning Platform (EeLP)6
- ELIXIR: The Czech Republic Node6
- Danish National Health Data Science Sandbox5
- ELIXIR Slovenia5
- LIPID MAPS5
- UNIVERSE-HPC project5
- COG-Train4
- Proteomics Academy4
- University of Cambridge Bioinformatics Training4
- ELIXIR AAI3
- Novo Nordisk Foundation Center for Protein Research3
- Pattern Institute3
- University of Edinburgh3
- DeiC – Danish e-Infrastructure Cooperation2
- SciLifeLab2
- Software Sustainability Institute2
- The Carpentries2
- Biomedical Sciences Research Center "Alexander Fleming"1
- CNAG-CRG1
- Centre for Digital Life Norway1
- Cloud-SPAN1
- EOSC4Cancer1
- ExCALIBUR1
- FAIRsharing1
- Fraunhofer FIT1
- Future Learn1
- Health-RI1
- NYU Langone Health1
- Open Science MOOC1
- Seqera1
- UCLouvain Bioinformatics Platform1
- VIB Conferences1
- WikiPathways1
- proteomicsML1
- Show N_FILTERS more
-
-
-
Keyword
- Galaxy Server administration68
- jupyter-notebook55
- Foundations of Data Science51
- biodiversity47
- Statistics and machine learning46
- Development in Galaxy45
- Single Cell42
- microgalaxy41
- Proteomics37
- Genome Annotation31
- Ecology30
- Transcriptomics30
- Microbiome29
- Contributing to the Galaxy Training Material28
- Using Galaxy and Managing your Data28
- Assembly25
- FAIR Data, Workflows, and Research22
- ansible21
- metagenomics21
- Imaging20
- Variant Analysis19
- git-gat19
- interactive-tools18
- work-in-progress18
- Climate17
- Teaching and Hosting Galaxy training17
- elixir17
- fair17
- Introduction to Galaxy Analyses16
- jbrowse116
- prokaryote16
- earth-system15
- gmod15
- Epigenetics13
- Sequence analysis12
- assembly12
- cyoa12
- paper-replication12
- MIGHTS11
- Metabolomics11
- ai-ml11
- covid1911
- Evolution10
- Image segmentation10
- data stewardship10
- eukaryote10
- label-free10
- metabolomics10
- nanopore10
- ocean10
- plants10
- 10x9
- Computational chemistry9
- DDA9
- one-health9
- Galaxy Community Building8
- Visualisation8
- workflows8
- EBV dataset7
- EBV workflow7
- collections7
- dmp7
- ecology7
- español7
- jobs7
- metabarcoding7
- Overlay6
- R6
- data management6
- deploying6
- deutsch6
- illumina6
- italiano6
- rmarkdown-notebook6
- ro-crate6
- train-the-trainers6
- transcriptomics6
- 16S5
- Digital Humanities5
- Large Language Model5
- SQL5
- bacteria5
- deconvolution5
- label-TMT115
- metatranscriptomics5
- mouse5
- single-cell5
- taxonomic profiling5
- virology5
- Bioimaging4
- Community4
- Conversion4
- DIA4
- Data management4
- FAIR4
- Multi-channel image4
- Object feature extraction4
- QC4
- SIG4
- amr4
- Show N_FILTERS more
-
-
-
Competency level
- Beginner564
- Not specified148
- Intermediate114
- Advanced15
- Show N_FILTERS more
-
-
-
Target audience
- Students550
- Galaxy Administrators113
- Instructors53
- Show N_FILTERS more
-
-
-
Author
- Helena Rasche127
- Bérénice Batut111
- Saskia Hiltemann65
- Björn Grüning49
- Simon Gladman33
- bebatut32
- bgruening32
- Yvan Le Bras29
- Anthony Bretaudeau28
- Anton Nekrutenko28
- Nate Coraor27
- Subina Mehta27
- John Chilton25
- Nicola Soranzo25
- The Carpentries23
- Anne Fouilloux21
- Fotis E. Psomopoulos21
- Marie Josse19
- Wendi Bacon19
- Bazante Sanders18
- Katarzyna Kamieniecka18
- Krzysztof Poterlowicz18
- Mehmet Tekman17
- shiltemann17
- Paul Zierep16
- Cristóbal Gallardo15
- Julia Jakiela14
- Pratik Jagtap14
- nekrut14
- Dave Clements13
- Delphine Lariviere13
- Donny Vrins13
- James Johnson13
- Katherine Do13
- Maria Doyle13
- Wolfgang Maier13
- Anup Kumar12
- Marius van den Beek12
- Melanie Föll12
- Simon Bray12
- Khaled Jum'ah11
- Pavankumar Videm11
- Daniel Blankenberg10
- Martin Čech10
- Anika Erxleben9
- Praveen Kumar9
- Anne Pajon8
- Avans Hogeschool8
- Diana Chiang Jurado8
- Emma Leith8
- Joachim Wolff8
- Kaivan Kamali8
- Lucille Delisle8
- Stéphanie Robin8
- Timothy J. Griffin8
- pajanne8
- Alex Ostrovsky7
- Alexandre Cormier7
- Anna Syme7
- Beatriz Serrano-Solano7
- Christopher Barnett7
- Erwan Corre7
- Florian Christoph Sigloch7
- Gildas Le Corguillé7
- Jeremy Goecks7
- Junhao Qiu7
- Laura Cooper7
- Laura Leroi7
- Leonid Kostrykin7
- Matthias Fahrner7
- Michael Charleston7
- Nadia Goué7
- Paulo Cilas Morais Lyra Junior7
- Ray Sajulga7
- Robert Andrews7
- joachimwolff7
- nsoranzo7
- stortebecker7
- Allegra Via6
- Andrew Mason6
- Branka Franicevic6
- Clemens Blank6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Morgan Howells6
- Patricia Palagi6
- Philippe Rocca-Serra6
- Polina Polunina6
- Raphael Mourad6
- Sara Morsy6
- Solenne Correard6
- Valentin Loux6
- Xenia Perez Sitja6
- erasche6
- erxleben6
- jmchilton6
- slugger706
- tnabtaf6
- Daniela Schneider5
- Dechen Bhuming5
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann590
- Helena Rasche501
- Björn Grüning426
- Bérénice Batut256
- Nicola Soranzo171
- Martin Čech128
- Anthony Bretaudeau106
- Cristóbal Gallardo104
- Niall Beard90
- Wendi Bacon73
- Nate Coraor70
- Armin Dadras65
- Gildas Le Corguillé63
- Marius van den Beek61
- William Durand59
- Simon Gladman53
- Beatriz Serrano-Solano48
- Pavankumar Videm48
- Teresa Müller48
- Lucille Delisle46
- Mehmet Tekman46
- Yvan Le Bras44
- Marie Josse36
- Wolfgang Maier36
- Melanie Föll35
- Anup Kumar33
- Simon Bray28
- Subina Mehta28
- Anne Fouilloux25
- Donny Vrins23
- Maria Doyle23
- Peter van Heusden23
- Julia Jakiela21
- Leonid Kostrykin20
- Tristan Reynolds20
- Bazante Sanders19
- Anton Nekrutenko18
- Deepti Varshney17
- Paul Zierep17
- Pratik Jagtap17
- Delphine Lariviere16
- Khaled Jum'ah16
- Marisa Loach15
- Daniela Schneider14
- David López14
- Mira Kuntz14
- Mélanie Petera14
- Diana Chiang Jurado13
- Matthias Bernt13
- Timothy J. Griffin13
- Pablo Moreno12
- Dave Clements11
- Gianmauro Cuccuru11
- Stéphanie Robin11
- Katarzyna Kamieniecka10
- Anna Syme9
- John Chilton9
- Mallory Freeberg9
- Paul De Geest9
- Alexandre Cormier8
- Amirhossein Naghsh Nilchi8
- Florian Heyl8
- Kaivan Kamali8
- Melissa Burke8
- Solenne Correard8
- Verena Moosmann8
- Christopher Barnett7
- Enis Afgan7
- Hans-Rudolf Hotz7
- Katherine Do7
- Morgan Howells7
- Tomas Klingström7
- Bert Droesbeke6
- Catherine Bromhead6
- Clemens Blank6
- Ekaterina Polkh6
- Florian Christoph Sigloch6
- Linelle Abueg6
- Paulo Cilas Morais Lyra Junior6
- Alex Ostrovsky5
- Alireza Khanteymoori5
- Andrea Bagnacani5
- Clea Siguret5
- Fabio Cumbo5
- John Davis5
- Riccardo Massei5
- Wandrille Duchemin5
- olisand5
- Coline Royaux4
- Dave B.4
- Eli Chadwick4
- Fotis E. Psomopoulos4
- Joachim Wolff4
- Laura Leroi4
- Nadia Goué4
- Natalie Whitaker-Allen4
- Phil Reed4
- Romane LIBOUBAN4
- Anika Erxleben3
- Engy Nasr3
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets332
- Associated Workflows309
- Jupyter Notebook (with Solutions)53
- Jupyter Notebook (without Solutions)53
- Input datasets34
- Associated slides9
- Development in Galaxy slides6
- Quarto/RMarkdown Notebook6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Galaxy Server administration slides2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Contributing to the Galaxy Training Material slides1
- Genome Annotation slides1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Statistics dataset1
- Transcriptomics slides1
- User Interface and Features dataset1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Hide materials with broken links
- Show archived materials
