Training materials
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slides
Architecture 04 - Galaxy Files and Directory Structure
• BeginnerSoftware engineering Development in Galaxy -
slides
Architecture 11 - Galaxy Markdown Architecture
• BeginnerSoftware engineering Development in Galaxy -
e-learning
Where to start with bioimage analysis in Galaxy
• BeginnerImaging Bioimaging Histology Imaging Microscopy -
slides
Gleam Image Learner - Validating Skin Lesion Classification on HAM10000
• BeginnerStatistics and probability Statistics and machine learning -
e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
e-learning
nb2workflow: Generating Galaxy Tools From Jupyter Notebooks
• BeginnerSoftware engineering Development in Galaxy -
e-learning
Integrating InvenioRDM-compatible Repositories with Galaxy
• BeginnerFAIR Data, Workflows, and Research InvenioRDM fair -
e-learning
Uploading Data to Zenodo from Galaxy
• BeginnerFAIR Data, Workflows, and Research fair zenodo -
e-learning
Best Practices for Citing Galaxy
• BeginnerIntroduction to Galaxy Analyses fair how-to-cite-galaxy -
e-learning
Hybrid genome assembly - Nanopore and Illumina
• BeginnerSequence assembly Assembly assembly denovo genomics illumina nanopore