Training materials
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e-learning
Python - Coding Style
•• IntermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Virtual Environments For Software Development
•• IntermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Conda Environments For Software Development
•• IntermediateSoftware engineering Foundations of Data Science conda jupyter-notebook -
e-learning
Python - Type annotations
•• IntermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Python - Testing
•• IntermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• IntermediateGenomics Genome Annotation eukaryote -
e-learning
Genome Assembly Quality Control
•• IntermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• IntermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• IntermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …