Training materials
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e-learning
Voronoi segmentation
•• IntermediateImaging Image segmentation Imaging Multi-channel image Object counting Overlay Tessellation -
slides
Galaxy Tabular Learner: Building a Model using Chowell clinical data
• BeginnerStatistics and probability Statistics and machine learning -
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• BeginnerImaging Image segmentation Imaging Parameter optimisation Validation -
slides
Genome assembly and assembly QC - Introduction short version
• BeginnerSequence assembly Assembly -
e-learning
Pretraining a Large Language Model (LLM) from Scratch on DNA Sequences
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Optimizing DNA Sequences for Biological Functions using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress -
e-learning
Fine-tuning a LLM for DNA Sequence Classification
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Predicting Mutation Impact with Zero-shot Learning using a pretrained DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Generating Artificial Yeast DNA Sequences using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Using BioImage.IO models for image analysis in Galaxy
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging