Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics13
    • Transcriptome13
    • Transcriptomics13
    • MicroRNA sequencing6
    • RNA sequencing6
    • RNA-Seq6
    • RNA-Seq analysis6
    • Small RNA sequencing6
    • Small RNA-Seq6
    • Small-Seq6
    • Transcriptome profiling6
    • WTSS6
    • Whole transcriptome shotgun sequencing6
    • miRNA-seq6
    • Chromosome walking5
    • Clone verification5
    • DNA-Seq5
    • DNase-Seq5
    • High throughput sequencing5
    • High-throughput sequencing5
    • NGS5
    • NGS data analysis5
    • Next gen sequencing5
    • Next generation sequencing5
    • Panels5
    • Primer walking5
    • Sanger sequencing5
    • Sequencing5
    • Targeted next-generation sequencing panels5
    • Single-cell genomics3
    • Single-cell sequencing3
    • Image analysis2
    • R2
    • R program2
    • R script2
    • Active learning1
    • Bayesian methods1
    • Biostatistics1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • DNA methylation1
    • Data rendering1
    • Data visualisation1
    • Descriptive statistics1
    • Ensembl learning1
    • Epigenetics1
    • Exomes1
    • Functional genome annotation1
    • Gaussian processes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Histone modification1
    • Inferential statistics1
    • Kernel methods1
    • Knowledge representation1
    • Machine learning1
    • Markov processes1
    • Metagenome annotation1
    • Methylation profiles1
    • Multivariate statistics1
    • Neural networks1
    • Personal genomics1
    • Probabilistic graphical model1
    • Probability1
    • Recommender system1
    • Reinforcement learning1
    • Statistics1
    • Statistics and probability1
    • Structural genome annotation1
    • Supervised learning1
    • Synthetic genomics1
    • Unsupervised learning1
    • Variant pattern analysis1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Content provider
    • Glittr.org
    • European Bioinformatics Institute (EBI)1
    • Show N_FILTERS more
    • Keyword
    • Spatial transcriptomics
    • R302
    • Python120
    • Transcriptomics112
    • RNA-seq103
    • Next generation sequencing97
    • Genomics78
    • Statistics72
    • Data science65
    • Machine learning61
    • Single-cell sequencing60
    • Data management57
    • Reproducibility50
    • Unix/Linux50
    • Version control48
    • Data visualization45
    • FAIR data43
    • Variant analysis39
    • General36
    • Workflows27
    • Metagenomics25
    • Containerization22
    • Shiny22
    • Genome assembly19
    • ChIP-seq18
    • Microbiology18
    • Nextflow18
    • Docker17
    • Artificial intelligence16
    • High performance computing15
    • Image analysis14
    • Julia14
    • Long read sequencing14
    • Quarto14
    • ATAC-seq13
    • Genome annotation13
    • Enrichment analysis12
    • Pathways and Networks12
    • Rmarkdown12
    • Epigenetics11
    • Cloud computing10
    • Proteomics10
    • Snakemake10
    • Comparative genomics9
    • Epidemiology9
    • Multiomics9
    • Singularity9
    • Galaxy6
    • CWL5
    • Large language models5
    • Metabolomics5
    • SPARQL4
    • GNU Make3
    • Java3
    • Ontology3
    • Population genetics3
    • SQL3
    • Data mining2
    • Knowledge graph2
    • Protein structure2
    • Rust2
    • Flow cytometry1
    • Immunology1
    • LaTeX1
    • MATLAB/Octave1
    • OpenMP1
    • Show N_FILTERS more
    • Competency level
    • Not specified21
    • Show N_FILTERS more
    • Licence
    • License Not Specified12
    • Creative Commons Attribution 4.0 International6
    • MIT License2
    • GNU General Public License v3.0 only1
    • Show N_FILTERS more
    • Author
    • Lukas Weber3
    • SIB Swiss Institute of Bioinformatics3
    • bioinformatics.ca2
    • Boston University1
    • BrainOmicsCourse1
    • Davis Laboratory1
    • ELIXIR Europe Training1
    • Estella Yixing Dong1
    • Fred Hutch Data Science Lab1
    • Integrative Computational Biology and Multiomics Research Group1
    • Mahfouz Lab1
    • NBIS - National Bioinformatics Infrastructure Sweden1
    • Sydney Precision Data Science Centre1
    • UC Davis Bioinformatics Core Training Page1
    • dario righelli1
    • juexinwang1
    • robinsonlabuzh1
    • Show N_FILTERS more
    • Contributor
    • Geert van Geest4
    • Lukas Weber4
    • Mark Robinson4
    • Martin Emons4
    • Benedetta Manzato3
    • CATALYST-project3
    • Julien Roux3
    • Peiying Cai3
    • Samuel Gunz3
    • Canadian Bioinformatics Workshops2
    • Deepak Tanwar2
    • Estella Yixing Dong2
    • Jcarlevaro2
    • ahmedmahfouz2
    • Ahmed Mohamed1
    • Alessia Valenti1
    • Alex Qin1
    • Alexandru Mahmoud1
    • Anna Schaar1
    • Artür Manukyan1
    • Boston University1
    • Boyi Guo1
    • Callum Sargeant1
    • Candace Savonen1
    • Carrie Wright1
    • Chloe Herman1
    • Christophe Avenel1
    • Claudio Novella Rausell1
    • Cristina Cheroni1
    • Davide Castaldi1
    • Davide Risso1
    • Eduard Chelebian1
    • Ellis Patrick1
    • Emanuele Villa1
    • Farhan Ameen1
    • Francesca Drummer1
    • Gaja Matassa1
    • Giovanni Palla1
    • Hannah Lyman1
    • Hannah Spitzer1
    • HeidiLischer1
    • Helena L. Crowell1
    • Ilaria Billato1
    • Ivan Berest1
    • Izaskun Mallona1
    • Jieran S.1
    • Kate Isaac1
    • Lori (Shepherd) Kern1
    • Marco1
    • Michael Totty1
    • Ning Liu1
    • Pratibha Panwar1
    • Rasool Saghaleyni1
    • Sengels241
    • Shreya Rao1
    • Simon Cockell1
    • Willem1
    • Ye Zheng1
    • actions-user1
    • cmills21
    • dario righelli1
    • geogav1
    • jhudsl-robot1
    • juexinwang1
    • ludvb1
    • mbaardwijk1
    • niklasmueboe1
    • oospina1
    • retogerber1
    • sebastiantiesmeyer1
    • sergiomarco251
    • wperlichek1
    • zhibinlu1
    • Show N_FILTERS more
    • Node
    • Switzerland21
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Hide materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Content provider: Glittr.org

and Include broken links: true

and Keywords: Spatial transcriptomics

21 materials found
  • sib-swiss/intro-spatial-transcriptomics-training

    ELIXIR node event
    Image analysis Data visualisation RNA-Seq Transcriptomics Spatial transcriptomics Image analysis Data visualization RNA-seq Transcriptomics
  • bioinformaticsdotca/ISO_2024

    ELIXIR node event
    Spatial transcriptomics
  • bioinformaticsdotca/ISO-V_2025

    ELIXIR node event
    Spatial transcriptomics
  • robinsonlabuzh/pasta

    ELIXIR node event
    Statistics and probability Statistics R Spatial transcriptomics
  • sib-swiss/seq-spatial-transcriptomics-training

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq Spatial transcriptomics Next generation sequencing Transcriptomics RNA-seq
  • mahfouzlab/MGC-BioSB-Spatial-Omics-Analysis-2025

    ELIXIR node event
    Spatial transcriptomics
  • juexinwang/Tutorial_ISMB2024

    ELIXIR node event
    Machine learning Single-cell sequencing Machine learning Artificial intelligence Single-cell sequencing Spatial transcriptomics
  • estellad/BC2_Spatial_Transcriptomics

    ELIXIR node event
    R script Spatial transcriptomics R
  • lmweber/OSTA

    ELIXIR node event
    R script Spatial transcriptomics R
  • elixir-europe-training/ELIXIR-SCO-spatial-omics

    ELIXIR node event
    Transcriptomics Image analysis Spatial transcriptomics Transcriptomics Image analysis
  • 1
  • 2
  • 3
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.