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    • Date added
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    • Scientific topic
    • MicroRNA sequencing11
    • RNA sequencing11
    • RNA-Seq11
    • RNA-Seq analysis11
    • Small RNA sequencing11
    • Small RNA-Seq11
    • Small-Seq11
    • Transcriptome profiling11
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    • Whole transcriptome shotgun sequencing11
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    • Assembly1
    • Sequence assembly1
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    • Content provider
    • NGS Registry
    • IFB French Institute of Bioinformatics1
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    • Keyword
    • Alignment
    • QC28
    • BAM20
    • Differential-expression19
    • Pre-processing19
    • RNA-Seq19
    • FASTQ18
    • R-programming16
    • Annotation14
    • Statistical-model14
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    • ChIP-Seq11
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    • Feature-summarisation10
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    • GFF38
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    • Data-format7
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    • Visualisation6
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    • FASTA3
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    • Assembly1
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    • Linux1
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    • Variant-calling1
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    • Competency level
    • Not specified26
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    • License Not Specified26
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    • Author
    • Bastian Schiffthaler @bastian4
    • Nicolas Delhomme @delhomme4
    • Eija Korpelainen @eija, [email protected]3
    • Jenny Drnevich @jenny3
    • Jessica Kirkpatrick [email protected]3
    • Radhika Khetani @radhika3
    • Anna Poetsch2
    • Benilton Carvalho @benilton2
    • Bert Overduin @bert2
    • Frederik Coppens @frcop2
    • @bastian1
    • @delhomme1
    • Albrectsen B.1
    • Bert Overduin, @bert1
    • Eija Korpelainen, @eija1
    • Frederik Coppens, @frcop1
    • Hvidsten T. R.1
    • Ingvarsson P. K.1
    • Jansson S.1
    • Mähler N.1
    • Oenskog J.1
    • Robinson K.1
    • Street N. R.1
    • based partially on material from Bori Mifsud and Ernest Turro1
    • based partially on material from Ernest Turro University of Cambridge1
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    • United Kingdom26
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Content provider: NGS Registry

and Keywords: Alignment

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26 materials found
  • RNA-seq module Frederik Coppens

    ELIXIR node event
    FASTQ Alignment BAM Differential-expression Statistical-model Exploratory-analysis
  • ChIP-seq analysis using R - Mapping and file formats

    ELIXIR node event
    RNA-Seq Sequence assembly ChIP-Seq RNA-Seq Alignment Data-format Assembly QC
  • Alignment of RNA-Seq data

    ELIXIR node event
    Alignment
  • Variant-calling

    ELIXIR node event
    Alignment Annotation BAM BCF De-novo-transcriptome-assembly Exploratory-analysis FASTQ Pre-processing QC Statistical-model …
  • Statistics and RNA-Seq

    ELIXIR node event
    FASTQ Alignment BAM Differential-expression Statistical-model Exploratory-analysis
  • Introduction to RNA-seq analysis 2014

    ELIXIR node event
    Alignment Differential-expression Feature-summarisation Pre-processing QC
  • RNA-seq training PSB 2013

    ELIXIR node event
    Alignment Differential-expression Feature-summarisation Pre-processing QC
  • Material for the course RNA-seq data analysis with Chipster

    ELIXIR node event
    RNA-Seq RNA-Seq FASTQ QC Pre-processing Alignment BAM Expression-estimation Feature-summarisation Differential-expression …
  • RNA-seq module Bert Overduin

    ELIXIR node event
    RNA-Seq RNA-Seq Pre-processing QC Alignment
  • Nicolas Delhomme and Bastian Schiffthaler

    ELIXIR node event
    RNA-Seq FASTQ GFF3 BAM Populus-tremula RNA-Seq Pre-processing QC Alignment Annotation …
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