Training materials
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PaN Training
Very Short Introductions: QC
core work-in-progress
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PaN Training
CRISPR screen analysis
CRISPR cell line essential genes eukaryote genome editing
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PaN Training
Microbial Variant Calling
gmod introduction jbrowse1 microgalaxy prokaryote
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PaN Training
Genomic Data Visualisation with JBrowse
gmod jbrowse1
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PaN Training
Using BioImage.IO models for image analysis in Galaxy
Deep learning Image annotation Image segmentation analyses
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PaN Training
Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy
Data handling Data management Data sharing introduction
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PaN Training
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
Parameter optimisation Validation advanced
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PaN Training
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
IDR dataset Overlay Rasterisation Spot detection analyses
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PaN Training
Object tracking using CellProfiler
Isolated object tracking Multi-channel image analyses
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PaN Training
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
Conversion Multi-channel image Object feature extraction ROI selection analyses