Materials - TeSS (Training eSupport System)

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- Scientific topic
- Data management17
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- Virology7
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- Ontology4
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- -10 signals1
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- Operation
- Data handling8
- File handling8
- File processing8
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- Data extraction6
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- Normalisation3
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- Design2
- Alignment1
- Alignment construction1
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- Data formatting1
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- Data visualisation1
- Exome variant detection1
- File format conversion1
- File formatting1
- File reformatting1
- Format conversion1
- Genome variant detection1
- Germ line variant calling1
- Molecular visualisation1
- Mutation detection1
- Ontology browsing1
- Ontology visualisation1
- Plotting1
- Quality control1
- Read pre-processing1
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- Sequence read pre-processing1
- Somatic variant calling1
- Validation1
- Variant calling1
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- Visualisation1
- de novo mutation detection1
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- Tool
- V-pipe2
- ViralZone2
- Cellosaurus1
- GlyConnect1
- ISMARA1
- nextstrain.org1
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- Standard database or policy
- Ontology Lookup Service2
- Cellosaurus1
- ModelArchive1
- PRoteomics IDEntifications database1
- Resource Identification Portal 1
- The European Genome-phenome Archive1
- UniProt Knowledgebase1
- Worldwide Protein Data Bank1
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- Content provider
- SIB Swiss Institute of Bioinformatics
- Glittr.org814
- GTN793
- European Bioinformatics Institute (EBI)487
- ERGA Knowledge Hub128
- GOBLET108
- Australian BioCommons88
- Bioinformatics Visualization72
- ELXIR-UK DaSH70
- Software Carpentry70
- DTLS - Dutch Techcentre For Life Sciences41
- VIB Training & Conferences37
- de.NBI36
- Khan Academy Statistics32
- IFB French Institute of Bioinformatics31
- BY-COVID25
- Canadian Bioinformatics Workshops25
- Bioconductor24
- Bioinformatics and Biomathematics Training Hub21
- ELIXIR20
- Coding for Reproducible Research (CfRR)19
- Coursera18
- ELIXIR Portugal18
- CINECA PROJECT15
- ELIXIR Estonia12
- NBIS11
- PerMedCoE11
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- VHP4Safety10
- eNanoMapper10
- Bioschemas9
- CSC - IT Center for Science9
- Data Carpentry9
- NanoCommons9
- Barcelona Supercomputing Center (BSC)8
- Department of Bioinformatics - BiGCaT, Maastricht University8
- Centre for Genomic Regulation (CRG)7
- InterMine7
- BioData.pt6
- Data Steward team Ghent University6
- ELIXIR-SI eLearning Platform (EeLP)6
- ELIXIR Luxembourg5
- ELIXIR Slovenia5
- ELIXIR: The Czech Republic Node5
- LIPID MAPS5
- University of Cambridge Bioinformatics Training4
- Danish National Health Data Science Sandbox3
- Novo Nordisk Foundation Center for Protein Research3
- Pattern Institute3
- University of Edinburgh3
- SciLifeLab2
- Software Sustainability Institute2
- The Carpentries2
- Biomedical Sciences Research Center "Alexander Fleming"1
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- Cloud-SPAN1
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- EOSC4Cancer1
- ExCALIBUR1
- FAIRsharing1
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- Open Science MOOC1
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- Keyword
- training30
- Clinical data11
- genes and genomes10
- reproducibility9
- RDF8
- medicine and health8
- FAIR7
- Knowledge graph7
- data management7
- next generation sequencing7
- programming7
- Interoperability6
- biostatistics6
- data visualisation6
- services and resources6
- Ontology5
- Query data5
- SARS-CoV-25
- SPARQL5
- alan bridge group5
- torsten schwede & thierry sengstag group5
- Standards4
- basic research4
- environmental science4
- infectious disease4
- mark ibberson group4
- GraphDB3
- SNOMED CT3
- Semantic Framework3
- data mining3
- database curation3
- experimental biology3
- machine learning3
- marc robinson-rechavi group3
- proteins and proteomes3
- transcriptomics3
- ATC2
- Animal pathogens2
- Blast2
- CHOP2
- E learning2
- LOINC2
- Metadata2
- Multiple sequence alignment2
- Phylogenetics2
- Python2
- Triplestore2
- Versioning of Terminology2
- comparative genomics2
- container2
- data security2
- evolution and phylogeny2
- functional genomics2
- high-performance computing2
- interoperability2
- ontology2
- Variant-calling1
- Accessibility1
- Automation1
- Bgee1
- Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material1
- Clinical1
- Computational modelling1
- Concepts design1
- Conceptualization1
- Data analysis1
- Data mining1
- Data reuse1
- Data semantics1
- Data storage1
- Data submission1
- Data validation1
- Data visualisation1
- Data visualization1
- Dataset template1
- FAIR Data1
- FAIR data1
- File formats1
- Findability1
- Gene regulation1
- High performance computing1
- ICD1
- ICD-10-GM1
- Identifiers1
- Inference1
- Mock data1
- NGS bioinformatics1
- Online Repository1
- Ontologies1
- Problem based learning1
- Programming1
- R1
- RDF graph generation1
- RDF graph validation1
- Reproducibility1
- Reusability1
- SHACL1
- SQL1
- Semantic artifacts generation1
- Semantic framework1
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- Competency level
- Beginner78
- Intermediate18
- Not specified11
- Advanced3
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- Licence
- License Not Specified78
- Creative Commons Attribution 4.0 International14
- Creative Commons Attribution Share Alike 4.0 International10
- Creative Commons Attribution Non Commercial Share Alike 4.0 International4
- Creative Commons Attribution Non Commercial 4.0 International2
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International2
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- Target audience
- Bioinformaticians15
- Data Managers12
- Data Scientists12
- Research Scientists12
- Biomedical Researchers11
- Bench biologists5
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Biologists4
- Laboratory technicians4
- Researchers4
- Veterinarians4
- Biologists with little or no prior computational experience3
- Bioinformaticians, Biologists with little or no prior computational experience.2
- Ontologists2
- Anyone dealing with cell lines with no or little knowledge of the Cellosaurus resource.1
- Anyone wishing to interpret graphs showing the progression of COVID-19.1
- Biologists, Genomicists, Computer Scientists1
- Biomedical researchers1
- Clinical Scientists1
- Clinicians1
- Graduate Students1
- Life Science Researchers1
- Life science researchers who are new to high performance computing1
- Life scientists with no or little knowledge of the ISMARA tool.1
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.1
- PhD students1
- Students, postdocs, and researchers, from any scientific environment (academia, facilities, companies, etc.) interested in viral data, as well as anyone looking for virion and viral genome images for use in teaching or publications.1
- Trainers1
- Training Designers1
- Training instructors1
- beginner bioinformaticians1
- biocurators1
- bioinformaticians1
- post-docs1
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- Author
- SIB Swiss Institute of Bioinformatics64
- Wandrille Duchemin15
- Monique Zahn13
- Personalized Health Informatics Group12
- Geert van Geest10
- Philippe Le Mercier6
- Robin Engler6
- Vasundra Touré6
- Deepak Tanwar5
- Marie-Claude Blatter5
- Thuong Van Du Tran5
- Elisabeth Gasteiger4
- Markus Müller4
- Vassilios Ioannidis4
- Frédéric Burdet3
- Grégoire Rossier3
- Joana Carlevaro3
- Joana Carlevaro Fita3
- Mark Robinson3
- Philippe Lemercier3
- Ana-Claudia Sima2
- Daniele Silvestro2
- Deepak Unni2
- Heinz Stockinger2
- Joao Lourenço2
- Marc Robinson-Rechavi2
- Martin Emons2
- Mikhail Pachkov2
- Peiying Cai2
- Petar Horki2
- Philip Krauss2
- Rachel Jeitziner Marcone2
- Thomas Junier2
- Volker Flegel2
- Ahmed Mahfouz1
- Amos Bairoch1
- Anna Schaar1
- Anne Morgat1
- Antonin Thiebaut1
- Antonin Thiébaut1
- Baker Matthew1
- Bräunlich Gerhard1
- Caterina Barillari1
- Christophe Dessimoz1
- Cécile Lebrand1
- Daan de Groot1
- David Clignez1
- Diana Marek1
- Dillenn Terumalai1
- Emmanuel Boutet1
- Erik van Nimwegen1
- Flavio Lombardo1
- Florence Mehl1
- Florent Tassy1
- Francesca Drummer1
- Frédéric Bastian1
- Frédéric Schutz1
- Frédéric Schütz1
- Frédérique Lisacek1
- George Gavrillidis1
- Gustavo Ruiz Buendia1
- Hans-Rudolf Hotz1
- Helena Crowell1
- Hennig John1
- Isabelle Dupanloup1
- Ivan Berest1
- Ivan Milenkovic1
- Ivan Topolsky1
- Ivo Pedruzzi1
- Jack Kuipers1
- Jeferyd Yepes-Garcia1
- Jerven Bolleman1
- Joana Pereira1
- John Hennig1
- Josefina Lascano Maillard1
- Julien Boccard1
- Julien Roux1
- Julien Wollbrett1
- Kristin Gnodke1
- Kristin Gnodtke1
- Lars Borm1
- Laurent Falquet1
- Lea Taylor1
- Lucille Delisle1
- Marco Kreuzer1
- Marco Varrone1
- Markus A Lill1
- Markus Mueller1
- Markus Muller1
- Martin Zablocki1
- Natasha Glover1
- Naveed Ishaque1
- Panayiotis Smeros1
- Philipp Wissmann1
- Rachel Marcone1
- Rafael Riudavets Puig1
- Raphaelle Luisier1
- Rasool Saghaleyni1
- Robert Waterhouse1
- Rostyslav Kuzyakiv1
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- Contributor
- Sabine Österle8
- Vassilios Ioannidis4
- Vasundra Touré3
- Amos Bairoch1
- Cecilia Torres1
- Erik van Nimwegen1
- Frédéric Schütz1
- Frédérique Lisacek1
- Geert van Geest1
- Grégoire Rossier1
- Ivan Topolsky1
- Janina Müller1
- Marco Pagni1
- Mikhail Pachkov1
- Philip Krauss1
- Philippe Le Mercier1
- Severine Duvaud1
- Tarcisio Mendes de Farias1
- Valeria Di Cola1
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- Resource type
- e-learning19
- Video12
- E-learning8
- Training materials7
- Mock data3
- E-Learning2
- Computer Software1
- Training materials with mock data1
- ViralZone1
- workflow1
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- Node
- Switzerland110
- United Kingdom1
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- Collection
- Elements of Data Management5
- SARS-CoV-2 : Studying a new virus5
- PINK project1
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- Status
- Active30
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