e-Learning
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ELIXIR TeSS
e-learning
Microbial Variant Calling
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
ELIXIR TeSS
e-learning
Calling very rare variants
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Genomic Data Visualisation with JBrowse
•• IntermediateVisualisation gmod jbrowse1 -
ELIXIR TeSS
e-learning
Visualisation with Circos
•• IntermediateVisualisation -
ELIXIR TeSS
e-learning
Genome annotation with Maker
••• AdvancedGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
ELIXIR TeSS
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• IntermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy … -
ELIXIR TeSS
e-learning
Genome annotation with Maker (short)
•• IntermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
ELIXIR TeSS
e-learning
CRISPR screen analysis
• BeginnerGenomics CRISPR Genome Annotation cell line essential genes genome editing -
ELIXIR TeSS
e-learning
Genome annotation with Prokka
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
ELIXIR TeSS
e-learning
Masking repeats with RepeatMasker
• BeginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote