Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly8
    • Exomes8
    • Genome annotation8
    • Genomes8
    • Genomics8
    • Personal genomics8
    • Sequence assembly8
    • Synthetic genomics8
    • Viral genomics8
    • Whole genomes8
    • Biological sequences5
    • Community analysis5
    • Environmental microbiology5
    • Metagenomics5
    • Microbial ecology5
    • Microbiome5
    • Molecular community analysis5
    • Sequence analysis5
    • Sequence databases5
    • Shotgun metagenomics5
    • Biodiversity4
    • Epidemiology3
    • Public health3
    • Public health and epidemiology3
    • Taxonomy3
    • Antimicrobial stewardship2
    • DNA metabarcoding2
    • De novo genome sequencing2
    • Environmental metabarcoding2
    • Genome sequencing2
    • Medical microbiology2
    • Metabarcoding2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • RNA metabarcoding2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • eDNA metabarcoding2
    • eRNA metabarcoding2
    • AMR1
    • Animal1
    • Animal biology1
    • Animal genetics1
    • Animal physiology1
    • Animals1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Botany1
    • Communicable disease1
    • Disease1
    • Entomology1
    • Extensive drug resistance (XDR)1
    • Infectious disease1
    • Metazoa1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Pathology1
    • Plant1
    • Plant anatomy1
    • Plant biology1
    • Plant cell biology1
    • Plant ecology1
    • Plant genetics1
    • Plant physiology1
    • Plant science1
    • Plants1
    • Total drug resistance (TDR)1
    • Transmissible disease1
    • Zoology1
    • Show N_FILTERS more
    • Tool
    • Galaxy16
    • Bandage4
    • fastp4
    • BUSCO3
    • Flye3
    • Minimap23
    • NanoPlot3
    • kraken23
    • BLAST2
    • Diamond2
    • FastQC2
    • GenomeScope 2.02
    • JBrowse2
    • KrakenTools2
    • Medaka2
    • MultiQC2
    • QUAST2
    • SAMtools2
    • gfastats2
    • gffread2
    • taxonomy_krona_chart2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BWA1
    • Bakta1
    • BamTools1
    • Bwa-mem21
    • CONCOCT1
    • CheckM1
    • Clair31
    • Clustal 1.8 (Clustal W, Clustal X)1
    • Clustal 2 (Clustal W, Clustal X)1
    • FEELnc1
    • Falco1
    • FastTree1
    • GECKO1
    • MLST1
    • MaxBin1
    • Merqury1
    • MetaBAT 21
    • Newick Utilities1
    • OMArk1
    • Racon1
    • STAR1
    • Smudgeplots1
    • bx-python1
    • dRep1
    • dada21
    • dastool1
    • ggplot21
    • phyloseq1
    • pilon1
    • shovill1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • GTN17
    • Show N_FILTERS more
    • Keyword
    • microgalaxy6
    • plants6
    • Assembly5
    • Microbiome5
    • biodiversity5
    • Genome Annotation4
    • assembly3
    • jbrowse13
    • nanopore3
    • 16S2
    • illumina2
    • metabarcoding2
    • metagenomics2
    • Braker31
    • Heatmap1
    • Introduction to Galaxy Analyses1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • QC1
    • Sequence analysis1
    • Using Galaxy and Managing your Data1
    • amr1
    • animals1
    • binning1
    • cyoa1
    • deutsch1
    • diversity1
    • español1
    • eukaryota1
    • eukaryote1
    • genome1
    • gmod1
    • italiano1
    • one-health1
    • polishing1
    • prokaryote1
    • Show N_FILTERS more
    • Competency level
    • Beginner14
    • Intermediate3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International17
    • Show N_FILTERS more
    • Target audience
    • Students17
    • Show N_FILTERS more
    • Author
    • Bérénice Batut6
    • Paul Zierep3
    • Anna Syme2
    • Bazante Sanders2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Anne Pajon1
    • Anthony Bretaudeau1
    • Anton Nekrutenko1
    • Björn Grüning1
    • Clemens Blank1
    • Deepti Varshney1
    • Dilmurat Yusuf1
    • Engy Nasr1
    • Esteban Perez-Wohlfeil1
    • Fabian Recktenwald1
    • Fotis E. Psomopoulos1
    • Helena Rasche1
    • Nicola Soranzo1
    • Nikos Pechlivanis1
    • Romane LIBOUBAN1
    • Sarah Peter1
    • Sophia Hampe1
    • Stéphanie Robin1
    • Tom Brown1
    • Vini Salazar1
    • Show N_FILTERS more
    • Contributor
    • Deepti Varshney
    • Saskia Hiltemann473
    • Helena Rasche392
    • Björn Grüning341
    • Bérénice Batut195
    • Nicola Soranzo112
    • Martin Čech92
    • Anthony Bretaudeau85
    • Niall Beard65
    • Wendi Bacon63
    • Armin Dadras60
    • Marius van den Beek56
    • Nate Coraor52
    • Cristóbal Gallardo49
    • Gildas Le Corguillé49
    • Teresa Müller45
    • Beatriz Serrano-Solano42
    • Lucille Delisle40
    • Pavankumar Videm38
    • William Durand38
    • Yvan Le Bras38
    • Mehmet Tekman37
    • Marie Josse36
    • Simon Gladman35
    • Wolfgang Maier35
    • Melanie Föll31
    • Anup Kumar27
    • Simon Bray25
    • Donny Vrins24
    • Peter van Heusden23
    • Subina Mehta23
    • Maria Doyle22
    • Leonid Kostrykin20
    • Bazante Sanders19
    • Julia Jakiela19
    • Tristan Reynolds18
    • Khaled Jum'ah17
    • Paul Zierep17
    • Anton Nekrutenko16
    • Anne Fouilloux15
    • Daniela Schneider14
    • Delphine Lariviere14
    • Mélanie Petera13
    • Pratik Jagtap13
    • David López12
    • Diana Chiang Jurado12
    • Marisa Loach12
    • Mira Kuntz12
    • Pablo Moreno12
    • Timothy J. Griffin12
    • Matthias Bernt11
    • Gianmauro Cuccuru10
    • Katarzyna Kamieniecka9
    • Paul De Geest9
    • Stéphanie Robin9
    • Amirhossein Naghsh Nilchi8
    • Anna Syme8
    • Elin Kronander8
    • Verena Moosmann8
    • Wolmar Nyberg Åkerström8
    • Enis Afgan7
    • Katherine Do7
    • Mallory Freeberg7
    • Markus Englund7
    • Mattias Strömberg7
    • Stephan Nylinder7
    • Yvonne Kallberg7
    • Bert Droesbeke6
    • Christopher Barnett6
    • Clemens Blank6
    • Erik Hedman6
    • Florian Christoph Sigloch6
    • Hans-Rudolf Hotz6
    • Linelle Abueg6
    • Morgan Howells6
    • Niclas Jareborg6
    • Solenne Correard6
    • Alireza Khanteymoori5
    • Clea Siguret5
    • Dave Clements5
    • Ekaterina Polkh5
    • Florian Heyl5
    • John Chilton5
    • John Davis5
    • Kaivan Kamali5
    • Riccardo Massei5
    • Tomas Klingström5
    • Wandrille Duchemin5
    • olisand5
    • Alexandre Cormier4
    • Coline Royaux4
    • Eli Chadwick4
    • Fabio Cumbo4
    • Fotis E. Psomopoulos4
    • Natalie Whitaker-Allen4
    • Vassilios Ioannidis4
    • Alex Ostrovsky3
    • Catherine Bromhead3
    • Engy Nasr3
    • Jasper Ouwerkerk3
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets15
    • Associated Workflows15
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Resource type: e-learning

and Contributors: Deepti Varshney

17 e-learning materials found
  • e-learning

    NCBI BLAST+ against the MAdLand

    • Beginner
    Sequence analysis Sequence analysis plants
  • e-learning

    Long non-coding RNAs (lncRNAs) annotation with FEELnc

    •• Intermediate
    Genomics Genome Annotation eukaryote
  • e-learning

    From small to large-scale genome comparison

    • Beginner
    Genomics Genome Annotation plants prokaryote
  • e-learning

    Chloroplast genome assembly

    • Beginner
    Sequence assembly Assembly biodiversity jbrowse1 nanopore plants
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
  • e-learning

    Understanding Galaxy history system

    • Beginner
    Using Galaxy and Managing your Data
  • e-learning

    From peaks to genes

    • Beginner
    Introduction to Galaxy Analyses deutsch español italiano
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.