Training materials
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ELIXIR TeSS
e-learning
Checking expected species and contamination in bacterial isolate
• BeginnerEcology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy -
ELIXIR TeSS
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• BeginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
ELIXIR TeSS
e-learning
Analyse Argo data
• BeginnerClimate argo earth-system ocean pangeo -
ELIXIR TeSS
e-learning
Introduction to sequencing with Python (part one)
• BeginnerSoftware engineering Foundations of Data Science jupyter-notebook -
ELIXIR TeSS
e-learning
Data visualisation Olympics - Visualization in R
• BeginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
ELIXIR TeSS
e-learning
Genome Annotation
• BeginnerGenomics Genome Annotation prokaryote work-in-progress -
ELIXIR TeSS
e-learning
Identification of AMR genes in an assembled bacterial genome
• BeginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
ELIXIR TeSS
e-learning
Creating an Official Gene Set
• BeginnerGenomics Genome Annotation apollo2 gmod work-in-progress -
ELIXIR TeSS
e-learning
Bacterial Genome Annotation
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
ELIXIR TeSS
e-learning
16S Microbial Analysis with mothur (extended)
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy