Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics3
    • Transcriptome3
    • Transcriptomics3
    • Assembly1
    • Biodiversity1
    • Diffraction experiment1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Imaging1
    • Microscopy1
    • Microscopy imaging1
    • Optical super resolution microscopy1
    • Personal genomics1
    • Photonic force microscopy1
    • Photonic microscopy1
    • Sequence assembly1
    • Synthetic genomics1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • BEDTools2
    • BUSCO1
    • Bwa-mem21
    • Cutadapt1
    • DESeq21
    • FASTX-Toolkit1
    • Falco1
    • FastQC1
    • FeatureCounts1
    • GOseq1
    • Galaxy Image Analysis1
    • GenomeScope 2.01
    • HISAT21
    • ImageJ21
    • Merqury1
    • Minimap21
    • QUAST1
    • R1
    • RSeQC1
    • SALSA1
    • SAMtools1
    • SCANPY1
    • Salmon1
    • gfastats1
    • ggplot21
    • pathview1
    • purge_dups1
    • Show N_FILTERS more
    • Content provider
    • GTN6
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics2
    • español2
    • 10x1
    • Assembly1
    • Bioimaging1
    • Histology1
    • Imaging1
    • Introduction to Galaxy Analyses1
    • Microscopy1
    • QC1
    • Single Cell1
    • VGP1
    • biodiversity1
    • bulk1
    • collections1
    • cyoa1
    • deutsch1
    • drosophila1
    • eukaryote1
    • italiano1
    • pacbio1
    • pathology1
    • rna-seq1
    • Show N_FILTERS more
    • Competency level
    • Beginner5
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students6
    • Show N_FILTERS more
    • Author
    • Anna Syme2
    • Bérénice Batut2
    • Diana Chiang Jurado2
    • Mallory Freeberg2
    • Nicola Soranzo2
    • Pavankumar Videm2
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Anton Nekrutenko1
    • Brandon Pickett1
    • Clemens Blank1
    • Cristóbal Gallardo1
    • Delphine Lariviere1
    • Giulio Formenti1
    • Hans-Rudolf Hotz1
    • Linelle Abueg1
    • Lucille Delisle1
    • Marcella Sozzoni1
    • Maria Doyle1
    • Mehmet Tekman1
    • Mo Heydarian1
    • Peter van Heusden1
    • Show N_FILTERS more
    • Contributor
    • Marius van den Beek
    • Saskia Hiltemann262
    • Björn Grüning214
    • Helena Rasche210
    • Bérénice Batut121
    • Nicola Soranzo64
    • Cristóbal Gallardo54
    • Pavankumar Videm53
    • Anthony Bretaudeau48
    • Niall Beard42
    • Martin Čech37
    • Teresa Müller34
    • Armin Dadras33
    • Gildas Le Corguillé29
    • Mehmet Tekman29
    • William Durand29
    • Wendi Bacon27
    • Melanie Föll26
    • Beatriz Serrano-Solano25
    • Wolfgang Maier24
    • Anup Kumar23
    • Subina Mehta22
    • Maria Doyle19
    • Yvan Le Bras19
    • Simon Bray18
    • Tristan Reynolds18
    • Anne Fouilloux15
    • Deepti Varshney15
    • Nate Coraor14
    • Paul Zierep14
    • Leonid Kostrykin13
    • Lucille Delisle13
    • Pratik Jagtap13
    • Timothy J. Griffin12
    • Anton Nekrutenko11
    • Delphine Lariviere11
    • Diana Chiang Jurado11
    • Julia Jakiela11
    • Marie Josse11
    • Mélanie Petera10
    • Anna Syme9
    • Marisa Loach9
    • Matthias Bernt9
    • Amirhossein Naghsh Nilchi8
    • Daniela Schneider8
    • Kaivan Kamali8
    • Pablo Moreno8
    • Simon Gladman8
    • Stéphanie Robin8
    • David López7
    • Katherine Do7
    • Verena Moosmann7
    • Alexandre Cormier6
    • Florian Heyl6
    • Hans-Rudolf Hotz6
    • Mallory Freeberg6
    • Morgan Howells6
    • Paulo Cilas Morais Lyra Junior6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clemens Blank5
    • Fabio Cumbo5
    • Linelle Abueg5
    • Clea Siguret4
    • Florian Christoph Sigloch4
    • Peter van Heusden4
    • Bazante Sanders3
    • Christopher Barnett3
    • Coline Royaux3
    • Dave Clements3
    • Ekaterina Polkh3
    • Engy Nasr3
    • Enis Afgan3
    • Joachim Wolff3
    • Katarzyna Kamieniecka3
    • Mateo Boudet3
    • Miaomiao Zhou3
    • Natalie Whitaker-Allen3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christine Oger2
    • Christoph Stritt2
    • CicoZhang2
    • Donny Vrins2
    • Esteban Perez-Wohlfeil2
    • Fidel Ramirez2
    • Graeme Tyson2
    • Helge Hecht2
    • Igor Makunin2
    • Jasper Ouwerkerk2
    • Jennifer Hillman-Jackson2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Junhao Qiu2
    • Khaled Jum'ah2
    • Kristina Gomoryova2
    • Laura Leroi2
    • Leily Rabbani2
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets
    • Associated Workflows8
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Filter limit reached, please log in to apply additional filters.

Tools: Galaxy

and Related resources: Associated Training Datasets

and Contributors: Marius van den Beek

6 materials found
  • ELIXIR TeSS

    e-learning

    Quantitative Analysis of Histological Staining Using Color Deconvolution

    • Beginner
    Imaging Bioimaging Histology Imaging Microscopy pathology
  • ELIXIR TeSS

    e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• Intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • ELIXIR TeSS

    e-learning

    Differential abundance testing of small RNAs

    • Beginner
    Transcriptomics Transcriptomics
  • ELIXIR TeSS

    e-learning

    Clustering 3K PBMCs with Scanpy

    • Beginner
    Transcriptomics 10x Single Cell
  • ELIXIR TeSS

    e-learning

    Reference-based RNA-Seq data analysis

    • Beginner
    Transcriptomics QC Transcriptomics bulk collections cyoa deutsch drosophila español italiano …
  • ELIXIR TeSS

    e-learning

    A short introduction to Galaxy

    • Beginner
    Introduction to Galaxy Analyses español
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.