Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics17
    • Transcriptome17
    • Transcriptomics17
    • Exometabolomics9
    • LC-MS-based metabolomics9
    • MS-based metabolomics9
    • MS-based targeted metabolomics9
    • MS-based untargeted metabolomics9
    • Mass spectrometry-based metabolomics9
    • Metabolites9
    • Metabolome9
    • Metabolomics9
    • Metabonomics9
    • NMR-based metabolomics9
    • Bottom-up proteomics4
    • Discovery proteomics4
    • MS-based targeted proteomics4
    • MS-based untargeted proteomics4
    • Metaproteomics4
    • Peptide identification4
    • Protein and peptide identification4
    • Proteomics4
    • Quantitative proteomics4
    • Targeted proteomics4
    • Top-down proteomics4
    • Epigenomics3
    • Bayesian methods1
    • Biodiversity1
    • Biostatistics1
    • Computational chemistry1
    • Descriptive statistics1
    • Diffraction experiment1
    • Gaussian processes1
    • Imaging1
    • Inferential statistics1
    • Markov processes1
    • Microscopy1
    • Microscopy imaging1
    • Multivariate statistics1
    • Optical super resolution microscopy1
    • Photonic force microscopy1
    • Photonic microscopy1
    • Probabilistic graphical model1
    • Probability1
    • Proteogenomics1
    • Statistics1
    • Statistics and probability1
    • Taxonomy1
    • Show N_FILTERS more
    • Tool
    • Galaxy58
    • SCANPY13
    • Falco6
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • MultiQC5
    • Workflow4Metabolomics5
    • anndata5
    • BEDTools4
    • FastQC4
    • Trim Galore4
    • ggplot24
    • xcms4
    • Biopython3
    • Cardinal3
    • DESeq23
    • DeepTools3
    • DropletUtils3
    • MACS3
    • Salmon3
    • annotatemyids3
    • BWA2
    • Open Babel2
    • RSeQC2
    • RStudio2
    • SAMtools2
    • STAR2
    • Targetfinder.org2
    • miRDeep22
    • Alevin1
    • AutoDock Vina1
    • BamTools1
    • Bowtie 21
    • ChEMBL1
    • ChemicalToolbox1
    • FeatureCounts1
    • Fpocket1
    • GOEnrichment1
    • GOseq1
    • IDR1
    • IsoformSwitchAnalyzeR1
    • JBrowse 21
    • MALDIquant1
    • MEME1
    • MFAssignR1
    • MSstatsTMT1
    • Matchms1
    • MaxQuant1
    • MethylDackel1
    • PfamScan1
    • R1
    • RDKit1
    • SeqCode1
    • Seurat1
    • StringTie1
    • The Protein Data Bank (PDB)1
    • UCSC Genome Browser Utilities1
    • UMI-tools1
    • UniProt1
    • blockbuster1
    • chemfp1
    • compute_sequence_length1
    • edgeR1
    • epiScanpy1
    • fastp1
    • g:Profiler1
    • gffcompare1
    • gffread1
    • msConvert1
    • pathview1
    • pyGenomeTracks1
    • rnaQUAST1
    • scp1
    • Show N_FILTERS more
    • Content provider
    • GTN66
    • Show N_FILTERS more
    • Keyword
    • Single Cell35
    • paper-replication12
    • MIGHTS11
    • 10x9
    • Metabolomics9
    • metabolomics9
    • Transcriptomics5
    • data management5
    • deconvolution5
    • jupyter-notebook5
    • single-cell5
    • transcriptomics5
    • Proteomics4
    • exposomics4
    • gc-ms4
    • lc-ms4
    • Epigenetics3
    • Introduction to Galaxy Analyses3
    • data import3
    • galaxy-intro3
    • imaging3
    • mass spectrometry imaging3
    • sc_formats3
    • Using Galaxy and Managing your Data2
    • computational-chemistry2
    • epigenetics2
    • history2
    • plants2
    • rmarkdown-notebook2
    • work-in-progress2
    • ChIP-seq1
    • Computational chemistry1
    • Contributing to the Galaxy Training Material1
    • Data handling1
    • Data management1
    • Data sharing1
    • Digital Humanities1
    • Drop-seq1
    • GO enrichment1
    • Imaging1
    • QC1
    • Statistics and machine learning1
    • Validation1
    • alternative splicing1
    • bulk1
    • collections1
    • cyoa1
    • deutsch1
    • drosophila1
    • español1
    • fair1
    • isoform switching1
    • italiano1
    • label-free1
    • melanoma1
    • miRNA1
    • microgalaxy1
    • mouse1
    • pseudobulk1
    • quantum-chemistry1
    • rna-seq1
    • spatial-transcriptomics1
    • stress tolerance1
    • workflows1
    • xenium1
    • Show N_FILTERS more
    • Competency level
    • Beginner56
    • Intermediate8
    • Advanced2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International
    • Show N_FILTERS more
    • Target audience
    • Students65
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Wendi Bacon13
    • Mehmet Tekman11
    • Pavankumar Videm10
    • Julia Jakiela9
    • Melanie Föll5
    • Morgan Howells5
    • Bérénice Batut4
    • Cristóbal Gallardo4
    • Helge Hecht4
    • Marisa Loach4
    • Björn Grüning3
    • Clemens Blank3
    • Mélanie Petera3
    • Nicola Soranzo3
    • Workflow4Metabolomics core team3
    • Anika Erxleben2
    • Anton Nekrutenko2
    • Beatriz Serrano-Solano2
    • Camila Goclowski2
    • Diana Chiang Jurado2
    • Gildas Le Corguillé2
    • Hans-Rudolf Hotz2
    • Helena Rasche2
    • Jean-François Martin2
    • Kristina Gomoryova2
    • Lucille Delisle2
    • Saskia Hiltemann2
    • Yann Guitton2
    • Alex Ostrovsky1
    • Amirhossein Naghsh Nilchi1
    • Anne Fouilloux1
    • Anne Pajon1
    • Daniel Blankenberg1
    • Dave Clements1
    • Devon Ryan1
    • Fidel Ramirez1
    • Florian Heyl1
    • Friederike Dündar1
    • Graham Etherington1
    • James Johnson1
    • Jessica Wallace1
    • Joachim Wolff1
    • Jonathan Manning1
    • Julien Saint-Vanne1
    • Khaled Jum'ah1
    • Krzysztof Poterlowicz1
    • Leily Rabbani1
    • Maarten Paul1
    • Mallory Freeberg1
    • Maren Stillger1
    • Maria Doyle1
    • Martin Etzrodt1
    • Matej Troják1
    • Matthias Fahrner1
    • Maxim Skoryk1
    • Menna Gamal1
    • Mo Heydarian1
    • Peter van Heusden1
    • Pratik Jagtap1
    • Simeon Schum1
    • Simon Bray1
    • Subina Mehta1
    • Timon Schlegel1
    • Timothy J. Griffin1
    • Verena Moosmann1
    • Vivek Bhardwaj1
    • Show N_FILTERS more
    • Contributor
    • Pavankumar Videm
    • Saskia Hiltemann594
    • Helena Rasche504
    • Björn Grüning433
    • Bérénice Batut254
    • Nicola Soranzo171
    • Martin Čech130
    • Anthony Bretaudeau106
    • Cristóbal Gallardo104
    • Niall Beard90
    • Wendi Bacon78
    • Nate Coraor71
    • Armin Dadras66
    • Gildas Le Corguillé63
    • Marius van den Beek62
    • William Durand59
    • Simon Gladman54
    • Teresa Müller48
    • Beatriz Serrano-Solano47
    • Lucille Delisle46
    • Mehmet Tekman46
    • Yvan Le Bras45
    • Robert Andrews40
    • Marie Josse37
    • Wolfgang Maier36
    • Melanie Föll35
    • Anup Kumar34
    • Munazah Andrabi34
    • Simon Bray28
    • Subina Mehta28
    • Anne Fouilloux25
    • Peter van Heusden24
    • Donny Vrins23
    • Maria Doyle23
    • Tristan Reynolds21
    • Julia Jakiela20
    • Leonid Kostrykin20
    • Bazante Sanders19
    • Anton Nekrutenko18
    • Deepti Varshney17
    • Geert van Geest17
    • Khaled Jum'ah17
    • Paul Zierep17
    • Delphine Lariviere16
    • Petros Kountouris16
    • Pratik Jagtap16
    • Marisa Loach15
    • Daniela Schneider14
    • David López14
    • Mira Kuntz14
    • Mélanie Petera14
    • Diana Chiang Jurado13
    • Matthias Bernt13
    • Candace Savonen12
    • Pablo Moreno12
    • Timothy J. Griffin12
    • Carrie Wright11
    • Dave Clements11
    • Gianmauro Cuccuru11
    • Katarzyna Kamieniecka11
    • Stéphanie Robin11
    • jhudsl-robot11
    • John Chilton10
    • Wandrille D.10
    • actions-user10
    • Amirhossein Naghsh Nilchi9
    • Anna Syme9
    • Kate Isaac9
    • Mallory Freeberg9
    • Paul De Geest9
    • Alexandre Cormier8
    • Florian Heyl8
    • Hans-Rudolf Hotz8
    • Kaivan Kamali8
    • Melissa Burke8
    • Solenne Correard8
    • Tomas Klingström8
    • Verena Moosmann8
    • Allyson Lister7
    • Christopher Barnett7
    • Daniel Sobral7
    • Enis Afgan7
    • Katherine Do7
    • Morgan Howells7
    • Paulo Cilas Morais Lyra Junior7
    • Bert Droesbeke6
    • Catherine Bromhead6
    • Clemens Blank6
    • Deepak Tanwar6
    • Ekaterina Polkh6
    • Florian Christoph Sigloch6
    • Linelle Abueg6
    • Riccardo Massei6
    • Alex Ostrovsky5
    • Alireza Khanteymoori5
    • Andrea Bagnacani5
    • Clea Siguret5
    • Elizabeth Humphries5
    • Fabio Cumbo5
    • John Davis5
    • Show N_FILTERS more
    • Resource type
    • e-learning64
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets57
    • Associated Workflows53
    • Jupyter Notebook (with Solutions)3
    • Jupyter Notebook (without Solutions)3
    • Quarto/RMarkdown Notebook2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Licence: Creative Commons Attribution 4.0 International

and Contributors: Pavankumar Videm

66 materials found
  • ELIXIR TeSS

    e-learning

    Extracting Workflows from Histories

    • Beginner
    Using Galaxy and Managing your Data history workflows
  • ELIXIR TeSS

    e-learning

    Understanding Galaxy history system

    • Beginner
    Using Galaxy and Managing your Data history
  • ELIXIR TeSS

    e-learning

    How to reproduce published Galaxy analyses

    • Beginner
    Introduction to Galaxy Analyses galaxy-intro
  • ELIXIR TeSS

    e-learning

    Galaxy Basics for genomics

    • Beginner
    Introduction to Galaxy Analyses galaxy-intro
  • ELIXIR TeSS

    e-learning

    Protein-ligand docking

    •• Intermediate
    Computational chemistry Computational chemistry computational-chemistry
  • ELIXIR TeSS

    e-learning

    Understanding Barcodes

    • Beginner
    Transcriptomics Single Cell single-cell
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.