Training materials
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ELIXIR TeSS
e-learning
Making clinical datasets FAIR
• BeginnerFAIR Data, Workflows, and Research data stewardship fair open -
ELIXIR TeSS
ErasmusMC-Bioinformatics/galaxy-courses
Sequencing Transcriptomics RNA-Seq Variant pattern analysis Galaxy Next generation sequencing RNA-seq Transcriptomics Variant analysis
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ELIXIR TeSS
swcarpentry/git-novice
Version control
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ELIXIR TeSS
e-learning
RO-Crate - Introduction
• BeginnerFAIR Data Workflows and Research -
ELIXIR TeSS
e-learning
Pox virus genome analysis from tiled-amplicon sequencing data
••• AdvancedGenetic variation Variant Analysis one-health virology -
ELIXIR TeSS
e-learning
Exporting Workflow Run RO-Crates from Galaxy
• BeginnerFAIR Data, Workflows, and Research ro-crate workflows -
ELIXIR TeSS
e-learning
RO-Crate in Python
• BeginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
ELIXIR TeSS
e-learning
Best practices for workflows in GitHub repositories
• BeginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
ELIXIR TeSS
e-learning
Submitting workflows to LifeMonitor
• BeginnerFAIR Data, Workflows, and Research ro-crate -
ELIXIR TeSS
e-learning
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• IntermediateMetabolomics Metabolomics exposomics gc-ms metabolomics