Training materials
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e-learning
Bacterial Genome Annotation
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
e-learning
Running a workshop as an instructor
• BeginnerTeaching and Hosting Galaxy training -
e-learning
Asynchronous training
• BeginnerTeaching and Hosting Galaxy training -
e-learning
RNA-seq Alignment with STAR
• BeginnerTranscriptomics Transcriptomics -
e-learning
Use Apptainer containers for running Galaxy jobs
• BeginnerGalaxy Server administration ansible git-gat jobs -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• IntermediateGenomics Genome Annotation eukaryote -
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
e-learning
Genome Assembly Quality Control
•• IntermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• IntermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …