Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly6
    • Sequence assembly6
    • Exomes5
    • Genome annotation5
    • Genomes5
    • Genomics5
    • Personal genomics5
    • Synthetic genomics5
    • Viral genomics5
    • Whole genomes5
    • DNA variation4
    • Genetic variation4
    • Genomic variation4
    • Mutation4
    • Polymorphism4
    • Somatic mutations4
    • Antimicrobial stewardship3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Algorithms2
    • Biological sequences2
    • Computer programming2
    • Data structures2
    • Programming languages2
    • Sequence analysis2
    • Sequence databases2
    • Software development2
    • Software engineering2
    • 3C technologies1
    • 3C-based methods1
    • Biodiversity1
    • Bottom-up proteomics1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Comparative genomics1
    • DNA polymorphism1
    • Discovery proteomics1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • MS-based targeted proteomics1
    • MS-based untargeted proteomics1
    • Metaproteomics1
    • Microsatellites1
    • Peptide identification1
    • Phylogenetic clocks1
    • Phylogenetic dating1
    • Phylogenetic simulation1
    • Phylogenetic stratigraphy1
    • Phylogeny1
    • Phylogeny reconstruction1
    • Protein and peptide identification1
    • Protein families1
    • Protein sequence classification1
    • Proteomics1
    • Quantitative proteomics1
    • RFLP1
    • SNP1
    • Single nucleotide polymorphism1
    • Targeted proteomics1
    • Top-down proteomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy14
    • BWA6
    • fastp5
    • SAMtools4
    • BEDTools3
    • MAFFT3
    • lofreq3
    • BamTools2
    • Bwa-mem22
    • MultiQC2
    • QUAST2
    • QualiMap2
    • SRA Software Toolkit2
    • Unicycler2
    • compute_sequence_length2
    • iVar2
    • snpEff2
    • BUSCO1
    • Circos1
    • Cutadapt1
    • Diamond1
    • FastQC1
    • FreeBayes1
    • Galactic Circos1
    • GenomeScope 2.01
    • Merqury1
    • Minimap21
    • RapidNJ1
    • SALSA1
    • UCSC Genome Browser Utilities1
    • VAPOR1
    • Vcflib1
    • bx-python1
    • gfastats1
    • iqtree1
    • orfipy1
    • purge_dups1
    • seqtk1
    • Show N_FILTERS more
    • Content provider
    • GTN18
    • Show N_FILTERS more
    • Keyword
    • Assembly5
    • prokaryote5
    • Variant Analysis4
    • biodiversity4
    • microgalaxy4
    • Introduction to Galaxy Analyses3
    • eukaryote3
    • one-health3
    • virology3
    • Foundations of Data Science2
    • Using Galaxy and Managing your Data2
    • VGP2
    • pacbio2
    • Genome Annotation1
    • Proteomics1
    • annotation1
    • collections1
    • cookbook1
    • covid191
    • evolution1
    • galaxy-intro1
    • gmod1
    • history1
    • jbrowse11
    • vgp1
    • Show N_FILTERS more
    • Competency level
    • Beginner12
    • Intermediate5
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International18
    • Show N_FILTERS more
    • Target audience
    • Students
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko15
    • Delphine Lariviere5
    • Alex Ostrovsky3
    • Björn Grüning2
    • Brandon Pickett2
    • Cristóbal Gallardo2
    • Daniel Blankenberg2
    • Dave Clements2
    • Helena Rasche2
    • Linelle Abueg2
    • Marius van den Beek2
    • Simon Gladman2
    • Wolfgang Maier2
    • Anna Syme1
    • Anne Pajon1
    • Clemens Blank1
    • Florian Christoph Sigloch1
    • Giulio Formenti1
    • Marcella Sozzoni1
    • Nicola Soranzo1
    • Saskia Hiltemann1
    • Tomas Klingström1
    • Show N_FILTERS more
    • Contributor
    • Anton Nekrutenko
    • Saskia Hiltemann462
    • Helena Rasche381
    • Björn Grüning333
    • Bérénice Batut191
    • Nicola Soranzo89
    • Anthony Bretaudeau79
    • Cristóbal Gallardo79
    • Pavankumar Videm66
    • Wendi Bacon58
    • Martin Čech56
    • Niall Beard55
    • Armin Dadras47
    • Beatriz Serrano-Solano46
    • Teresa Müller46
    • William Durand43
    • Mehmet Tekman42
    • Yvan Le Bras41
    • Gildas Le Corguillé40
    • Melanie Föll35
    • Anup Kumar34
    • Subina Mehta33
    • Wolfgang Maier32
    • Marius van den Beek30
    • Marie Josse29
    • Simon Bray24
    • Anne Fouilloux23
    • Donny Vrins23
    • Maria Doyle22
    • Nate Coraor22
    • Peter van Heusden22
    • Tristan Reynolds21
    • Leonid Kostrykin20
    • Bazante Sanders18
    • Julia Jakiela18
    • Khaled Jum'ah18
    • Deepti Varshney17
    • Lucille Delisle17
    • Petros Kountouris16
    • Pratik Jagtap16
    • Paul Zierep15
    • Daniela Schneider14
    • Delphine Lariviere14
    • Diana Chiang Jurado13
    • David López12
    • Marisa Loach12
    • Mélanie Petera12
    • Timothy J. Griffin12
    • Dave Clements11
    • Katarzyna Kamieniecka11
    • Matthias Bernt11
    • Pablo Moreno11
    • Stéphanie Robin11
    • Simon Gladman10
    • Amirhossein Naghsh Nilchi9
    • Anna Syme9
    • Mallory Freeberg9
    • Alexandre Cormier8
    • Florian Heyl8
    • Kaivan Kamali8
    • Verena Moosmann8
    • Christopher Barnett7
    • Katherine Do7
    • Melissa Burke7
    • Morgan Howells7
    • Paulo Cilas Morais Lyra Junior7
    • Clemens Blank6
    • Ekaterina Polkh6
    • Florian Christoph Sigloch6
    • Hans-Rudolf Hotz6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clea Siguret5
    • Fabio Cumbo5
    • Linelle Abueg5
    • Riccardo Massei5
    • Wandrille Duchemin5
    • olisand5
    • Andrea Bagnacani4
    • Coline Royaux4
    • Fotis E. Psomopoulos4
    • Joachim Wolff4
    • Laura Leroi4
    • Nadia Goué4
    • Natalie Whitaker-Allen4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Sotiroula Chatzimatthaiou4
    • Anika Erxleben3
    • Arthur Barreau3
    • Eli Chadwick3
    • Engy Nasr3
    • Enis Afgan3
    • Erwan Corre3
    • Jasper Ouwerkerk3
    • Jennifer Hillman-Jackson3
    • Kenza Bazi-Kabbaj3
    • Krzysztof Poterlowicz3
    • Maria Christina Maniou3
    • Martijn Kersloot3
    • Show N_FILTERS more
    • Resource type
    • e-learning16
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets11
    • Associated Workflows11
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Contributors: Anton Nekrutenko

and Target audience: Students

18 materials found
  • ELIXIR TeSS

    e-learning

    Making sense of a newly assembled genome

    • Beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • ELIXIR TeSS

    e-learning

    Unicycler Assembly

    • Beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • ELIXIR TeSS

    e-learning

    Detection and quantitation of N-termini (degradomics) via N-TAILS

    •• Intermediate
    Proteomics Proteomics
  • ELIXIR TeSS

    e-learning

    Using dataset collections

    •• Intermediate
    Using Galaxy and Managing your Data collections
  • ELIXIR TeSS

    e-learning

    Understanding Galaxy history system

    • Beginner
    Using Galaxy and Managing your Data history
  • ELIXIR TeSS

    e-learning

    NGS data logistics

    • Beginner
    Introduction to Galaxy Analyses
  • ELIXIR TeSS

    e-learning

    Galaxy Basics for genomics

    • Beginner
    Introduction to Galaxy Analyses galaxy-intro
  • ELIXIR TeSS

    slides

    Unicycler Assembly

    • Beginner
    Sequence assembly Assembly prokaryote
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.