Materials - TeSSHub

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- Exomes31
- Genome annotation31
- Genomes31
- Genomics31
- Personal genomics31
- Synthetic genomics31
- Viral genomics31
- Whole genomes31
- Biological sequences26
- Sequence analysis26
- Sequence databases26
- Assembly24
- Sequence assembly24
- Community analysis18
- Environmental microbiology18
- Microbial ecology18
- Microbiome18
- Molecular community analysis18
- Metagenomics17
- Shotgun metagenomics17
- Antimicrobial stewardship16
- Medical microbiology16
- Microbial genetics16
- Microbial physiology16
- Microbial surveillance16
- Microbiological surveillance16
- Microbiology16
- Molecular infection biology16
- Molecular microbiology16
- Bottom-up proteomics15
- Comparative transcriptomics15
- Discovery proteomics15
- MS-based targeted proteomics15
- MS-based untargeted proteomics15
- Metaproteomics15
- Peptide identification15
- Protein and peptide identification15
- Proteomics15
- Quantitative proteomics15
- Targeted proteomics15
- Top-down proteomics15
- Transcriptome15
- Transcriptomics15
- Biodiversity13
- Taxonomy13
- DNA variation8
- Epigenomics8
- Genetic variation8
- Genomic variation8
- Mutation8
- Polymorphism8
- Somatic mutations8
- Epidemiology6
- Public health6
- Public health and epidemiology6
- Bayesian methods5
- Biostatistics5
- DNA metabarcoding5
- De novo genome sequencing5
- Descriptive statistics5
- Environmental metabarcoding5
- Gaussian processes5
- Gene and protein families5
- Gene families5
- Gene family5
- Gene system5
- Genes, gene family or system5
- Genome sequencing5
- Inferential statistics5
- Markov processes5
- Metabarcoding5
- Multivariate statistics5
- Probabilistic graphical model5
- Probability5
- Protein families5
- Protein sequence classification5
- RNA metabarcoding5
- Statistics5
- Statistics and probability5
- WGS5
- Whole genome resequencing5
- Whole genome sequencing5
- eDNA metabarcoding5
- eRNA metabarcoding5
- Communicable disease4
- Computational chemistry4
- Computational ecology4
- Ecoinformatics4
- Ecological informatics4
- Ecology4
- Ecosystem science4
- Infectious disease4
- Metatranscriptomics4
- Proteogenomics4
- Transmissible disease4
- AMR3
- Algorithms3
- Antibiotic resistance (ABR)3
- Antifungal resistance3
- Antimicrobial resistance3
- Show N_FILTERS more
- Tool
- Galaxy126
- FastQC23
- SAMtools14
- JBrowse13
- MultiQC12
- BEDTools11
- BWA10
- DeepTools9
- QUAST9
- NanoPlot8
- fastp8
- taxonomy_krona_chart8
- Bandage7
- Cutadapt7
- Falco7
- BUSCO6
- GEMINI6
- BamTools5
- FreeBayes5
- STAR5
- kraken25
- BLAST4
- Flye4
- KrakenTools4
- MetaPhlAn4
- Minimap24
- Trimmomatic4
- Unicycler4
- ggplot24
- BCFtools3
- Bwa-mem23
- Cardinal3
- HISAT23
- Newick Utilities3
- Stacks3
- Trim Galore3
- UniProt3
- mothur3
- msConvert3
- scikit-learn3
- Apollo2
- Bakta2
- Biopython2
- Bowtie2
- Bowtie 22
- Bracken2
- ChIPpeakAnno2
- DESeq22
- Diamond2
- FASTQE2
- FASTX-Toolkit2
- GenomeScope 2.02
- GraPhlAn2
- HUMAnN22
- InterProScan (EBI)2
- JBrowse 22
- MACS2
- MaxQuant2
- Medaka2
- Merqury2
- OMArk2
- RSeQC2
- Racon2
- RepeatMasker2
- SPAdes2
- Salmon2
- SortMeRNA2
- TRANSIT2
- UCSC Genome Browser Utilities2
- UMI-tools2
- Unipept2
- Vcflib2
- VelvetOptimiser2
- bx-python2
- clusterProfiler2
- eggNOG-mapper v22
- ewastools2
- export2graphlan2
- funannotate2
- gfastats2
- gffread2
- humann2
- lofreq2
- metaQuantome2
- pycoQC2
- seqtk2
- snippy2
- staramr2
- tbl2gff32
- ABRicate1
- AUGUSTUS1
- Bio3D1
- COMBAT-TB Workbench1
- CONCOCT1
- CheckM1
- Circos1
- Clair31
- Clustal 1.8 (Clustal W, Clustal X)1
- Clustal 2 (Clustal W, Clustal X)1
- Combine Metaphlan and HUMAnN1
- Show N_FILTERS more
- Content provider
- GTN134
- Show N_FILTERS more
- Keyword
- microgalaxy32
- biodiversity21
- Assembly17
- Genome Annotation17
- Microbiome15
- Proteomics15
- jbrowse115
- gmod13
- prokaryote12
- Transcriptomics10
- eukaryote9
- Epigenetics8
- Variant Analysis8
- Introduction to Galaxy Analyses7
- work-in-progress7
- Sequence Analysis6
- assembly6
- español6
- nanopore6
- Single Cell5
- Statistics and Machine Learning5
- deutsch5
- italiano5
- label-TMT115
- metagenomics5
- 16S4
- Computational Chemistry4
- DDA4
- Ecology4
- bacteria4
- illumina4
- metabarcoding4
- plants4
- ChIP-seq3
- EBV dataset3
- Foundations of Data Science3
- RAD-seq3
- Using Galaxy and Managing your Data3
- amr3
- collections3
- cyoa3
- genetic composition EBV class3
- imaging3
- mass spectrometry imaging3
- metatranscriptomics3
- one-health3
- EBV workflow2
- Earth Data Science2
- HeLa2
- Metabolomics2
- QC2
- VGP2
- apollo22
- covid192
- essential genes2
- eukaryota2
- human2
- interactive-tools2
- maker2
- metabolomics2
- mouse2
- pacbio2
- tnseq2
- 10x1
- Braker31
- Contributing to the Galaxy Training Material1
- EBV workflowz1
- Evolution1
- FAIR Learning Objects1
- FAIR-by-Design Learning Materials1
- FAIR-by-Design Methodology1
- Heatmap1
- MIGHTS1
- Machine learning1
- Nanopore data analysis1
- Pan-cancer1
- Pathogens detection1
- Phylogenetic tree1
- SILAC1
- Visualisation1
- annotation1
- beer1
- binning1
- bulk1
- cancer biomarkers1
- citizen science1
- climate1
- cookbook1
- data handling1
- diversity1
- drosophila1
- ecology1
- evolution1
- functional annotation1
- galaxy-intro1
- helixer1
- intermine1
- miRNA1
- network analysis1
- oncogenes and tumor suppressor genes1
- Show N_FILTERS more
- Competency level
- Beginner107
- Intermediate24
- Advanced3
- Show N_FILTERS more
- Licence
- Creative Commons Attribution 4.0 International134
- Show N_FILTERS more
- Target audience
- Students133
- Instructors1
- Show N_FILTERS more
- Author
- Bérénice Batut32
- Anton Nekrutenko13
- Anthony Bretaudeau12
- Saskia Hiltemann12
- Subina Mehta11
- Delphine Lariviere10
- Simon Gladman10
- Björn Grüning9
- Helena Rasche9
- Anika Erxleben7
- Anna Syme7
- Nicola Soranzo6
- Paul Zierep6
- Pratik Jagtap6
- Cristóbal Gallardo5
- Dechen Bhuming5
- Emma Leith5
- Joachim Wolff5
- Katherine Do5
- Wolfgang Maier5
- Alex Ostrovsky4
- Alexandre Cormier4
- Bazante Sanders4
- Christopher Barnett4
- Clemens Blank4
- Dave Clements4
- Erwan Corre4
- Florian Christoph Sigloch4
- Laura Leroi4
- Mallory Freeberg4
- Mehmet Tekman4
- Nadia Goué4
- Pavankumar Videm4
- Praveen Kumar4
- Simon Bray4
- Stéphanie Robin4
- Timothy J. Griffin4
- Vivek Bhardwaj4
- Anne Fouilloux3
- Anup Kumar3
- Daniel Blankenberg3
- Engy Nasr3
- Fidel Ramirez3
- Maria Doyle3
- Marie Crane3
- Melanie Föll3
- Mo Heydarian3
- Torsten Seemann3
- Yvan Le Bras3
- Andrea Bagnacani2
- Anne Pajon2
- Brandon Pickett2
- Ekaterina Polkh2
- Fotis E. Psomopoulos2
- Friederike Dündar2
- Katarzyna Kamieniecka2
- Khaled Jum'ah2
- Krzysztof Poterlowicz2
- Leily Rabbani2
- Linelle Abueg2
- Lisanna Paladin2
- Peter van Heusden2
- Polina Polunina2
- Ray Sajulga2
- Romane LIBOUBAN2
- Sophia Hampe2
- Teresa Müller2
- Tharindu Senapathi2
- Vini Salazar2
- Achim Winandi1
- Ahmed Hamid Awan1
- Anastas Mishev1
- Ava Hoffman1
- Avans Hogeschool1
- Beatriz Serrano-Solano1
- Belinda Phipson1
- Brigida Gallone1
- Cameron Hyde1
- Carolin Leister1
- Chao Zhang1
- Christine Hadrossek1
- Christoph Stritt1
- Clea Siguret1
- Daniel Maticzka1
- Daniela Brites1
- Daniela Butano1
- David Christiany1
- Devon Ryan1
- Didier Debroas1
- Dilmurat Yusuf1
- Dominique Green1
- Donny Vrins1
- Fabio Cumbo1
- Florence Combes1
- Florian Heyl1
- Galo A. Goig1
- Giulio Formenti1
- Hans-Rudolf Hotz1
- Harriet Dashnow1
- Hui Tang1
- Show N_FILTERS more
- Contributor
- Bérénice Batut
- Saskia Hiltemann294
- Helena Rasche238
- Björn Grüning232
- Nicola Soranzo67
- Pavankumar Videm58
- Cristóbal Gallardo56
- Anthony Bretaudeau50
- Niall Beard45
- Martin Čech38
- Teresa Müller35
- Armin Dadras33
- Mehmet Tekman33
- Gildas Le Corguillé31
- Wendi Bacon31
- William Durand30
- Subina Mehta27
- Melanie Föll26
- Beatriz Serrano-Solano25
- Anup Kumar24
- Wolfgang Maier24
- Maria Doyle20
- Simon Bray20
- Yvan Le Bras19
- Tristan Reynolds18
- Anne Fouilloux15
- Deepti Varshney15
- Julia Jakiela14
- Lucille Delisle14
- Nate Coraor14
- Paul Zierep14
- Leonid Kostrykin13
- Pratik Jagtap13
- Timothy J. Griffin12
- Anton Nekrutenko11
- Delphine Lariviere11
- Diana Chiang Jurado11
- Marie Josse11
- Daniela Schneider10
- Mélanie Petera10
- Anna Syme9
- Marisa Loach9
- Matthias Bernt9
- Amirhossein Naghsh Nilchi8
- Kaivan Kamali8
- Mallory Freeberg8
- Marius van den Beek8
- Pablo Moreno8
- Simon Gladman8
- Stéphanie Robin8
- David López7
- Katherine Do7
- Verena Moosmann7
- Alexandre Cormier6
- Florian Heyl6
- Hans-Rudolf Hotz6
- Morgan Howells6
- Paulo Cilas Morais Lyra Junior6
- Alireza Khanteymoori5
- Bert Droesbeke5
- Christopher Barnett5
- Clemens Blank5
- Fabio Cumbo5
- Linelle Abueg5
- Peter van Heusden5
- Clea Siguret4
- Donny Vrins4
- Ekaterina Polkh4
- Florian Christoph Sigloch4
- Bazante Sanders3
- Coline Royaux3
- Dave Clements3
- Engy Nasr3
- Enis Afgan3
- Joachim Wolff3
- Katarzyna Kamieniecka3
- Khaled Jum'ah3
- Mateo Boudet3
- Miaomiao Zhou3
- Natalie Whitaker-Allen3
- Timon Schlegel3
- Xavier Garnier3
- Alex Ostrovsky2
- Andrea Bagnacani2
- Anika Erxleben2
- Camila Goclowski2
- Carlos Chee Mendonça2
- Christine Oger2
- Christoph Stritt2
- CicoZhang2
- Daniel Blankenberg2
- Esteban Perez-Wohlfeil2
- Fidel Ramirez2
- Graeme Tyson2
- Helge Hecht2
- Igor Makunin2
- Jasper Ouwerkerk2
- Jennifer Hillman-Jackson2
- Jonathan Kreplak2
- Jonathan Manning2
- Show N_FILTERS more
- Resource type
- e-learning121
- slides13
- Show N_FILTERS more
- Related resource
- Associated Training Datasets
- Associated Workflows126
- Jupyter Notebook (with Solutions)11
- Jupyter Notebook (without Solutions)11
- Show N_FILTERS more
Show materials from all spaces
Show disabled materials
Show materials with broken links
Show archived materials

Training materials

Contributors: Bérénice Batut

and Related resources: Associated Training Datasets

134 materials found

Results per page:

1
2
…
6
7
8
9
10
11
12
13
14