Training materials
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ELIXIR TeSS
e-learning
Tracking of mitochondria and capturing mitoflashes
•• IntermediateImaging Imaging Isolated object tracking Temporal analysis Time-lapse data -
ELIXIR TeSS
e-learning
16S Microbial analysis with Nanopore data
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy nanopore … -
ELIXIR TeSS
slides
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics -
ELIXIR TeSS
e-learning
End-to-End Tissue Microarray Image Analysis with Galaxy-ME
•• IntermediateImaging Image segmentation Imaging Tissue imaging -
ELIXIR TeSS
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics miRNA plants stress tolerance -
ELIXIR TeSS
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• BeginnerTranscriptomics 10x Single Cell paper-replication plants -
ELIXIR TeSS
e-learning
Generating a single cell matrix using Alevin
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
• BeginnerClimate interactive-tools -
ELIXIR TeSS
e-learning
Analyse HeLa fluorescence siRNA screen
•• IntermediateImaging Fluorescence microscopy High-throughput screening Image segmentation Image thresholding Imaging Object feature extraction Overlay -
ELIXIR TeSS
e-learning
Nucleoli segmentation and feature extraction using CellProfiler
•• IntermediateImaging Image segmentation Imaging Multi-channel image Object feature extraction