Training materials
Scientific topics: Optical super resolution microscopy
and Competency level: Beginner
and Contributors: Björn Grüning
7 materials found
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ELIXIR TeSS
e-learning
AI pipeline for annotating marine species (Project Moorev - Marine)
• BeginnerImaging AI segmentation Imaging Marine ecosystems YOLO biodiversity deep learning object detection -
ELIXIR TeSS
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• BeginnerImaging Image segmentation Imaging Parameter optimisation Validation -
ELIXIR TeSS
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• BeginnerImaging IDR dataset Imaging Overlay Rasterisation Spot detection -
ELIXIR TeSS
e-learning
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• BeginnerImaging Bioimaging Data management FAIR Data, Workflows, and Research Metadata -
ELIXIR TeSS
e-learning
FAIR Bioimage Metadata
• BeginnerImaging Bioimaging Data management FAIR Data, Workflows, and Research Metadata -
ELIXIR TeSS
e-learning
Introduction to Image Analysis using Galaxy
• BeginnerImaging Conversion Fluorescence microscopy Image segmentation Image thresholding Imaging Object counting Overlay -
ELIXIR TeSS
slides
Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler
• BeginnerImaging Imaging