Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics18
    • Transcriptome18
    • Transcriptomics18
    • Show N_FILTERS more
    • Tool
    • Galaxy16
    • FastQC4
    • HISAT24
    • MultiQC4
    • RSeQC4
    • BEDTools3
    • Cutadapt3
    • GOseq3
    • DESeq22
    • DeepTools2
    • Falco2
    • FeatureCounts2
    • SAMtools2
    • STAR2
    • Salmon2
    • Trimmomatic2
    • annotatemyids2
    • ggplot22
    • Biopython1
    • ChiRA1
    • EGSEA1
    • GOEnrichment1
    • IsoformSwitchAnalyzeR1
    • MEME1
    • Peakachu1
    • PfamScan1
    • R1
    • RCAS1
    • SRA Software Toolkit1
    • StringTie1
    • Subread1
    • Targetfinder.org1
    • Trim Galore1
    • Trinity1
    • UMI-tools1
    • fastp1
    • fgsea1
    • gffcompare1
    • gffread1
    • limma1
    • miRDeep21
    • pathview1
    • pyGenomeTracks1
    • rnaQUAST1
    • Show N_FILTERS more
    • Content provider
    • GTN18
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics
    • biodiversity32
    • Single Cell31
    • Galaxy Server administration29
    • microgalaxy27
    • Proteomics26
    • Statistics and machine learning24
    • Using Galaxy and Managing your Data19
    • jupyter-notebook18
    • Contributing to the Galaxy Training Material17
    • Ecology16
    • Genome Annotation16
    • ansible16
    • Assembly15
    • Variant Analysis14
    • git-gat14
    • interactive-tools14
    • jbrowse114
    • Imaging13
    • earth-system12
    • paper-replication12
    • FAIR Data, Workflows, and Research11
    • MIGHTS11
    • gmod11
    • Microbiome10
    • Teaching and Hosting Galaxy training10
    • elixir10
    • prokaryote10
    • Climate9
    • Development in Galaxy9
    • Foundations of Data Science9
    • Introduction to Galaxy Analyses9
    • eukaryote9
    • work-in-progress9
    • DDA8
    • Epigenetics8
    • Image segmentation8
    • ocean8
    • one-health8
    • Computational chemistry7
    • assembly7
    • covid197
    • cyoa7
    • plants7
    • workflows7
    • 10x6
    • EBV dataset6
    • EBV workflow6
    • data stewardship6
    • fair6
    • Large Language Model5
    • Metabolomics5
    • ai-ml5
    • collections5
    • dmp5
    • español5
    • jobs5
    • train-the-trainers5
    • transcriptomics5
    • DIA4
    • Multi-channel image4
    • Overlay4
    • QC4
    • Sequence analysis4
    • deutsch4
    • illumina4
    • italiano4
    • mouse4
    • nanopore4
    • storage4
    • ChIP-seq3
    • Data management3
    • FAIR3
    • Galaxy Community Building3
    • Object feature extraction3
    • RAD-seq3
    • Visualisation3
    • amr3
    • bacteria3
    • data import3
    • data management3
    • deploying3
    • genetic composition EBV class3
    • monitoring3
    • pacbio3
    • proteogenomics3
    • ro-crate3
    • virology3
    • 16S2
    • Bioimaging2
    • CoDex2
    • Community2
    • Conversion2
    • Deep learning2
    • Digital Humanities2
    • EML2
    • Evolution2
    • Fluorescence microscopy2
    • HeLa2
    • Image annotation2
    • Show N_FILTERS more
    • Competency level
    • Beginner16
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International18
    • Show N_FILTERS more
    • Target audience
    • Students18
    • Show N_FILTERS more
    • Author
    • Maria Doyle7
    • Belinda Phipson3
    • Bérénice Batut3
    • Mallory Freeberg3
    • Pavankumar Videm3
    • Anthony Bretaudeau2
    • Cristóbal Gallardo2
    • Harriet Dashnow2
    • Lucille Delisle2
    • Mo Heydarian2
    • Anika Erxleben1
    • Anna Trigos1
    • Anne Siegel1
    • Anton Nekrutenko1
    • Beatriz Serrano-Solano1
    • Charity Law1
    • Clemens Blank1
    • Daniel Maticzka1
    • Erwan Corre1
    • Florian Heyl1
    • Fotis E. Psomopoulos1
    • Gildas Le Corguillé1
    • Helena Rasche1
    • IGC Bioinformatics Unit1
    • Iacopo Cristoferi1
    • Jovana Maksimovic1
    • Marek Ostaszewski1
    • Mateo Boudet1
    • Matt Ritchie1
    • Matti Hoch1
    • Myrthe van Baardwijk1
    • Nicola Soranzo1
    • Olivier Dameron1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Shian Su1
    • Toby Hodges1
    • Xavier Garnier1
    • Xi Liu1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning
    • Saskia Hiltemann23
    • Helena Rasche20
    • Nicola Soranzo12
    • Bérénice Batut10
    • Gildas Le Corguillé6
    • Lucille Delisle6
    • Maria Doyle6
    • Niall Beard6
    • Anthony Bretaudeau4
    • Cristóbal Gallardo4
    • Pavankumar Videm4
    • William Durand4
    • Mallory Freeberg3
    • Martin Čech3
    • Armin Dadras2
    • Florian Heyl2
    • Marius van den Beek2
    • Mehmet Tekman2
    • Wolfgang Maier2
    • Xavier Garnier2
    • Amirhossein Naghsh Nilchi1
    • Andrea Bagnacani1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Beatriz Serrano-Solano1
    • CicoZhang1
    • Clea Siguret1
    • Clemens Blank1
    • Ekaterina Polkh1
    • Fotis E. Psomopoulos1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • IGC Bioinformatics Unit1
    • James Taylor1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Mateusz Kuzak1
    • Matti Hoch1
    • Mira Kuntz1
    • Mo Heydarian1
    • Mélanie Petera1
    • Nate Coraor1
    • Peter-Bram 't Hoen1
    • Sanjay Kumar Srikakulam1
    • Simon Bray1
    • Sofoklis Keisaris1
    • Teresa Müller1
    • The Carpentries1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets17
    • Associated Workflows15
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Keywords: Transcriptomics

and Contributors: Björn Grüning

and Resource type: e-learning

18 e-learning materials found
  • e-learning

    Genome-wide alternative splicing analysis

    ••• Advanced
    Transcriptomics Transcriptomics alternative splicing isoform switching
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• Intermediate
    Transcriptomics Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    RNA-RNA interactome data analysis

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    RNA-Seq analysis with AskOmics Interactive Tool

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics miRNA plants stress tolerance
  • e-learning

    De novo transcriptome reconstruction with RNA-Seq

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Visualization of RNA-Seq results with Volcano Plot

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    De novo transcriptome assembly, annotation, and differential expression analysis

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    3: RNA-seq genes to pathways

    • Beginner
    Transcriptomics Transcriptomics mouse
  • e-learning

    CLIP-Seq data analysis from pre-processing to motif detection

    • Beginner
    Transcriptomics Transcriptomics
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.