Training materials
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ELIXIR TeSS
e-learning
Cleaning GBIF data using OpenRefine
• BeginnerEcology Biodiversity Ecology biodiversity data cleaning -
ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
ELIXIR TeSS
e-learning
Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy
•• IntermediateImaging Data handling Data management Data sharing Imaging ROI selection -
ELIXIR TeSS
e-learning
Tracking of mitochondria and capturing mitoflashes
•• IntermediateImaging Imaging Isolated object tracking Temporal analysis Time-lapse data -
ELIXIR TeSS
e-learning
GO Enrichment Analysis on Single-Cell RNA-Seq Data
• BeginnerGO enrichment Single Cell single-cell -
ELIXIR TeSS
e-learning
Ecoregionalization workflow tutorial
• BeginnerEcology Biodiversity EBV workflow Ecology biodiversity earth-system ecology gbif interactive-tools modeling … -
ELIXIR TeSS
e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
ELIXIR TeSS
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
ELIXIR TeSS
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
ELIXIR TeSS
e-learning
Marine Omics identifying biosynthetic gene clusters
• BeginnerEcology Biodiversity Ecology biodiversity earth-system marine omics ocean