Training materials
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ELIXIR TeSS
e-learning
Sentinel 5P data visualisation
• BeginnerEarth Data science atmosphere earth-system satellite data volcano -
ELIXIR TeSS
e-learning
Ocean's variables study
• BeginnerEarth Data science earth-system netcdf data ocean -
ELIXIR TeSS
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
ELIXIR TeSS
e-learning
Pathway analysis with the MINERVA Platform
•• IntermediateTranscriptomics Transcriptomics bulk cyoa rna-seq viz -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Scanpy
• BeginnerMIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat
• BeginnerMIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Analyse Argo data
• BeginnerEarth Data science argo earth-system ocean pangeo -
ELIXIR TeSS
e-learning
Identification of AMR genes in an assembled bacterial genome
• BeginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
ELIXIR TeSS
e-learning
Bacterial Genome Annotation
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
ELIXIR TeSS
e-learning
16S Microbial Analysis with mothur (extended)
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy