Training materials
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ELIXIR TeSS
e-learning
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• IntermediateMetabolomics Metabolomics exposomics gc-ms metabolomics -
ELIXIR TeSS
e-learning
Supervised Learning with Hyperdimensional Computing
•• IntermediateStatistics and probability Statistics and Machine Learning -
ELIXIR TeSS
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• Beginner10x Single Cell epigenetics -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3 (R)
• BeginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
ELIXIR TeSS
e-learning
End-to-End Tissue Microarray Image Analysis with Galaxy-ME
•• IntermediateImaging Image segmentation Imaging Tissue imaging -
ELIXIR TeSS
e-learning
Removing the effects of the cell cycle
• BeginnerDrop-seq Single Cell -
ELIXIR TeSS
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• BeginnerSingle Cell deconvolution transcriptomics -
ELIXIR TeSS
e-learning
NCBI BLAST+ against the MAdLand
• BeginnerSequence analysis Sequence Analysis plants -
ELIXIR TeSS
e-learning
Somatic Variant Discovery from WES Data Using Control-FREEC
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication