Training materials
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ELIXIR TeSS
e-learning
Genome-wide alternative splicing analysis
••• AdvancedTranscriptomics Transcriptomics alternative splicing isoform switching -
ELIXIR TeSS
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
ELIXIR TeSS
e-learning
Pathway analysis with the MINERVA Platform
•• IntermediateTranscriptomics Transcriptomics bulk cyoa rna-seq viz -
ELIXIR TeSS
e-learning
Metatranscriptomics analysis using microbiome RNA-seq data
• BeginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
ELIXIR TeSS
e-learning
Assembly of metagenomic sequencing data
• BeginnerMetagenomics Sequence assembly Microbial ecology Microbiome assembly metagenomics microgalaxy -
ELIXIR TeSS
e-learning
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• BeginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
ELIXIR TeSS
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• Beginner10x Single Cell epigenetics -
ELIXIR TeSS
e-learning
Somatic Variant Discovery from WES Data Using Control-FREEC
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …