Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Algorithms9
    • Computer programming9
    • Data structures9
    • Programming languages9
    • Software development9
    • Software engineering9
    • Assembly6
    • Sequence assembly6
    • Comparative transcriptomics5
    • Epigenomics5
    • Transcriptome5
    • Transcriptomics5
    • Bayesian methods2
    • Biological sequences2
    • Biostatistics2
    • Community analysis2
    • Descriptive statistics2
    • Environmental microbiology2
    • Exometabolomics2
    • Gaussian processes2
    • Inferential statistics2
    • LC-MS-based metabolomics2
    • MS-based metabolomics2
    • MS-based targeted metabolomics2
    • MS-based untargeted metabolomics2
    • Markov processes2
    • Mass spectrometry-based metabolomics2
    • Metabolites2
    • Metabolome2
    • Metabolomics2
    • Metabonomics2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • Multivariate statistics2
    • NMR-based metabolomics2
    • Probabilistic graphical model2
    • Probability2
    • Sequence analysis2
    • Sequence databases2
    • Shotgun metagenomics2
    • Statistics2
    • Statistics and probability2
    • Bottom-up proteomics1
    • DNA variation1
    • Diffraction experiment1
    • Discovery proteomics1
    • Exomes1
    • Genetic variation1
    • Genome annotation1
    • Genomes1
    • Genomic variation1
    • Genomics1
    • Imaging1
    • MS-based targeted proteomics1
    • MS-based untargeted proteomics1
    • Metaproteomics1
    • Microscopy1
    • Microscopy imaging1
    • Mutation1
    • Optical super resolution microscopy1
    • Peptide identification1
    • Personal genomics1
    • Photonic force microscopy1
    • Photonic microscopy1
    • Polymorphism1
    • Protein and peptide identification1
    • Proteomics1
    • Quantitative proteomics1
    • Somatic mutations1
    • Synthetic genomics1
    • Targeted proteomics1
    • Top-down proteomics1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy22
    • FastQC7
    • MultiQC4
    • SAMtools4
    • BEDTools2
    • Cutadapt2
    • DeepTools2
    • NanoPlot2
    • QUAST2
    • Trim Galore2
    • Unicycler2
    • fastp2
    • scikit-learn2
    • BUSCO1
    • BamTools1
    • Bandage1
    • Biopython1
    • CellProfiler1
    • ChIPpeakAnno1
    • Clustal 1.8 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • DESeq21
    • FASTQE1
    • FASTX-Toolkit1
    • Falco1
    • GECKO1
    • GEMINI1
    • GraPhlAn1
    • Heinz1
    • IsoformSwitchAnalyzeR1
    • JBrowse1
    • JBrowse 21
    • MACS1
    • Merqury1
    • MetaPhlAn1
    • PfamScan1
    • RSeQC1
    • SPAdes1
    • STAR1
    • Salmon1
    • SeqCode1
    • SortMeRNA1
    • StringTie1
    • Targetfinder.org1
    • UCSC Genome Browser Utilities1
    • VelvetOptimiser1
    • Workflow4Metabolomics1
    • clusterProfiler1
    • ewastools1
    • export2graphlan1
    • gffcompare1
    • gffread1
    • humann1
    • miRDeep21
    • pyGenomeTracks1
    • pycoQC1
    • rnaQUAST1
    • seqtk1
    • taxonomy_krona_chart1
    • xcms1
    • Show N_FILTERS more
    • Content provider
    • GTN52
    • Show N_FILTERS more
    • Keyword
    • Development in Galaxy9
    • Assembly6
    • Epigenetics5
    • Transcriptomics5
    • Galaxy Server administration4
    • Contributing to the Galaxy Training Material3
    • Introduction to Galaxy Analyses3
    • Climate2
    • Metabolomics2
    • Microbiome2
    • Sequence analysis2
    • Statistics and machine learning2
    • climate2
    • Genome Annotation1
    • Imaging1
    • Proteomics1
    • Teaching and Hosting Galaxy training1
    • Using Galaxy and Managing your Data1
    • Variant Analysis1
    • Visualisation1
    • covid191
    • prokaryote1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International52
    • Show N_FILTERS more
    • Target audience
    • Students35
    • Galaxy Administrators13
    • Instructors4
    • Show N_FILTERS more
    • Author
    • Bérénice Batut13
    • Saskia Hiltemann12
    • Björn Grüning9
    • Helena Rasche7
    • Anthony Bretaudeau5
    • Cristóbal Gallardo4
    • Nicola Soranzo4
    • Simon Gladman4
    • Alexandre Cormier3
    • Anne Fouilloux3
    • Anne Pajon3
    • Dave Clements3
    • John Chilton3
    • Laura Leroi3
    • Cyril Monjeaud2
    • Erwan Corre2
    • Joachim Wolff2
    • Kaivan Kamali2
    • Ryan Abernathey2
    • Stéphanie Robin2
    • Youri Hoogstrate2
    • Yvan Le Bras2
    • Ahmed Hamid Awan1
    • Alaa Elghamry1
    • Andrea Bagnacani1
    • Anika Erxleben1
    • Anne Siegel1
    • Anton Nekrutenko1
    • Aysam Guerler1
    • Basile Goussard1
    • Beatriz Serrano-Solano1
    • Chao Zhang1
    • Christophe Klopp1
    • Christopher Barnett1
    • Clemens Blank1
    • Cécile Canlet1
    • Dannon Baker1
    • Delphine Lariviere1
    • Engy Nasr1
    • Esteban Perez-Wohlfeil1
    • Florian Heyl1
    • Gildas Le Corguillé1
    • Hervé Ménager1
    • Jean-François Martin1
    • Katarzyna Kamieniecka1
    • Krzysztof Poterlowicz1
    • Leily Rabbani1
    • Loraine Guéguen1
    • Lucille Delisle1
    • Maria Doyle1
    • Markus Wolfien1
    • Martin Čech1
    • Mateo Boudet1
    • Melanie Föll1
    • Michele Maroni1
    • Mélanie Petera1
    • Nadia Goué1
    • Nate Coraor1
    • Olha Nahorna1
    • Olivier Dameron1
    • Paul Zierep1
    • Pavankumar Videm1
    • Pratik Jagtap1
    • Sanne Abeln1
    • Stéphanie Legras1
    • Subina Mehta1
    • Valentin Marcon1
    • Xavier Garnier1
    • Show N_FILTERS more
    • Contributor
    • Cristóbal Gallardo
    • Saskia Hiltemann104
    • Helena Rasche101
    • Björn Grüning74
    • Nicola Soranzo58
    • Bérénice Batut47
    • Martin Čech36
    • Niall Beard25
    • William Durand21
    • Anthony Bretaudeau19
    • Simon Gladman17
    • Nate Coraor16
    • Gildas Le Corguillé13
    • Wendi Bacon8
    • Anne Fouilloux7
    • Mehmet Tekman7
    • Lucille Delisle6
    • Melissa Burke6
    • Anup Kumar5
    • Beatriz Serrano-Solano5
    • Alexandre Cormier4
    • Armin Dadras4
    • John Chilton4
    • Marius van den Beek4
    • Yvan Le Bras4
    • Catherine Bromhead3
    • Dave Clements3
    • Kaivan Kamali3
    • Melanie Föll3
    • Paulo Cilas Morais Lyra Junior3
    • Teresa Müller3
    • Alex Ostrovsky2
    • Andrea Bagnacani2
    • Anton Nekrutenko2
    • Caterina Fuster-Barceló2
    • Dave B.2
    • David López2
    • Delphine Lariviere2
    • Erwan Corre2
    • Florian Heyl2
    • Katarzyna Kamieniecka2
    • Laura Leroi2
    • Mallory Freeberg2
    • Marisa Loach2
    • Mira Kuntz2
    • Pavankumar Videm2
    • Simon Bray2
    • Subina Mehta2
    • Tomas Klingström2
    • Alaa-Elghamry1
    • Anna Syme1
    • Avani Khadilkar1
    • Christof De Bo1
    • CicoZhang1
    • Dannon Baker1
    • Ekaterina Polkh1
    • Esteban Perez-Wohlfeil1
    • Fabio Cumbo1
    • Gianmauro Cuccuru1
    • Hans-Rudolf Hotz1
    • Jennifer Hillman-Jackson1
    • Joachim Wolff1
    • Julia Jakiela1
    • Junhao Qiu1
    • Leily Rabbani1
    • Maria Doyle1
    • Mateo Boudet1
    • Matthias Bernt1
    • Michele Maroni1
    • Morgan Howells1
    • Mélanie Petera1
    • Nadia Goué1
    • Olivia Doppelt-Azeroual1
    • Phil Reed1
    • RJMW1
    • Rahmot Afolabi1
    • Romane LIBOUBAN1
    • Ross Lazarus1
    • Solenne Correard1
    • Stéphanie Robin1
    • Swathi Nataraj1
    • Vlad Visan1
    • Wolfgang Maier1
    • Xavier Garnier1
    • Youri Hoogstrate1
    • kpbioteam1
    • Show N_FILTERS more
    • Resource type
    • slides
    • e-learning38
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets22
    • Associated Workflows21
    • Jupyter Notebook (with Solutions)1
    • Jupyter Notebook (without Solutions)1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Competency level: Beginner

and Contributors: Cristóbal Gallardo

and Resource type: slides

52 materials found
  • slides

    Workshop Kickoff

    • Beginner
    Teaching and Hosting Galaxy training
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Introduction to Transcriptomics

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Introduction to proteomics, protein identification, quantification and statistical modelling

    • Beginner
    Proteomics Proteomics
  • slides

    Visualisations in Galaxy

    • Beginner
    Visualisation
  • slides

    Introduction to DNA Methylation data analysis

    • Beginner
    Epigenomics Epigenetics
  • slides

    Introduction to ChIP-Seq data analysis

    • Beginner
    Epigenomics Epigenetics
  • slides

    EWAS Epigenome-Wide Association Studies Introduction

    • Beginner
    Epigenomics Epigenetics
  • slides

    Galaxy on the Cloud

    • Beginner
    Galaxy Server administration
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.