Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Transcriptomics
    • Assembly18
    • Sequence assembly18
    • Exomes12
    • Genome annotation12
    • Genomes12
    • Genomics12
    • Personal genomics12
    • Synthetic genomics12
    • Viral genomics12
    • Whole genomes12
    • Algorithms11
    • Comparative transcriptomics11
    • Computer programming11
    • Data structures11
    • Programming languages11
    • Software development11
    • Software engineering11
    • Transcriptome11
    • Biological sequences8
    • Sequence analysis8
    • Sequence databases8
    • Biodiversity6
    • Community analysis6
    • Environmental microbiology6
    • Epigenomics6
    • Metagenomics6
    • Microbial ecology6
    • Microbiome6
    • Molecular community analysis6
    • Shotgun metagenomics6
    • Epidemiology4
    • Public health4
    • Public health and epidemiology4
    • Taxonomy4
    • Antimicrobial stewardship3
    • Exometabolomics3
    • LC-MS-based metabolomics3
    • MS-based metabolomics3
    • MS-based targeted metabolomics3
    • MS-based untargeted metabolomics3
    • Mass spectrometry-based metabolomics3
    • Medical microbiology3
    • Metabolites3
    • Metabolome3
    • Metabolomics3
    • Metabonomics3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • NMR-based metabolomics3
    • Bayesian methods2
    • Biostatistics2
    • DNA variation2
    • De novo genome sequencing2
    • Descriptive statistics2
    • Diffraction experiment2
    • Gaussian processes2
    • Genetic variation2
    • Genome sequencing2
    • Genomic variation2
    • Imaging2
    • Inferential statistics2
    • Markov processes2
    • Microscopy2
    • Microscopy imaging2
    • Multivariate statistics2
    • Mutation2
    • Optical super resolution microscopy2
    • Photonic force microscopy2
    • Photonic microscopy2
    • Polymorphism2
    • Probabilistic graphical model2
    • Probability2
    • Somatic mutations2
    • Statistics2
    • Statistics and probability2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • 3C technologies1
    • 3C-based methods1
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Biomimeic chemistry1
    • Bottom-up proteomics1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Computational ecology1
    • Show N_FILTERS more
    • Tool
    • Galaxy8
    • MultiQC5
    • DESeq23
    • Falco3
    • RSeQC3
    • STAR3
    • Biopython2
    • FastQC2
    • Heinz2
    • IsoformSwitchAnalyzeR2
    • PfamScan2
    • Salmon2
    • StringTie2
    • Targetfinder.org2
    • Trim Galore2
    • fastp2
    • gffcompare2
    • gffread2
    • miRDeep22
    • pyGenomeTracks2
    • rnaQUAST2
    • DropletUtils1
    • FeatureCounts1
    • GOseq1
    • R1
    • ggplot21
    • pathview1
    • Show N_FILTERS more
    • Content provider
    • GTN11
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics9
    • Single Cell2
    • 10x1
    • QC1
    • alternative splicing1
    • bulk1
    • collections1
    • cyoa1
    • deutsch1
    • drosophila1
    • español1
    • isoform switching1
    • italiano1
    • metatranscriptomics1
    • miRNA1
    • network analysis1
    • plants1
    • rna-seq1
    • stress tolerance1
    • Show N_FILTERS more
    • Competency level
    • Beginner9
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International11
    • Show N_FILTERS more
    • Target audience
    • Students11
    • Show N_FILTERS more
    • Author
    • Cristóbal Gallardo4
    • Pavankumar Videm4
    • Anika Erxleben2
    • Bérénice Batut2
    • Chao Zhang2
    • Lucille Delisle2
    • Mehmet Tekman2
    • Anne Siegel1
    • Anthony Bretaudeau1
    • Beatriz Serrano-Solano1
    • Clemens Blank1
    • Daniel Blankenberg1
    • Hans-Rudolf Hotz1
    • Mallory Freeberg1
    • Maria Doyle1
    • Markus Wolfien1
    • Mateo Boudet1
    • Mo Heydarian1
    • Nicola Soranzo1
    • Olivier Dameron1
    • Peter van Heusden1
    • Sanne Abeln1
    • Xavier Garnier1
    • Show N_FILTERS more
    • Contributor
    • Cristóbal Gallardo
    • Helena Rasche43
    • Saskia Hiltemann42
    • Björn Grüning37
    • Mehmet Tekman19
    • Bérénice Batut18
    • Nicola Soranzo18
    • Pavankumar Videm14
    • Wendi Bacon14
    • Maria Doyle10
    • Anthony Bretaudeau9
    • Canadian Bioinformatics Workshops9
    • Hannah Lyman9
    • Geert van Geest8
    • Gildas Le Corguillé8
    • Lucille Delisle8
    • Will Gammerdinger8
    • Martin Čech7
    • Niall Beard7
    • Radhika Khetani7
    • Hugo Tavares6
    • Jihe Liu6
    • Meeta Mistry6
    • Abigail Edwards5
    • Julia Jakiela5
    • Matt Settles5
    • William Durand5
    • Amélie Julé4
    • Armin Dadras4
    • AshKernow4
    • Beatriz Serrano-Solano4
    • Julien Roux4
    • Mallory Freeberg4
    • Miguel Cardoso4
    • Simon Bray4
    • The Gulbenkian Training Programme in Bioinformatics4
    • ahmedmahfouz4
    • bpdurbin4
    • jessyjli4
    • marypiper4
    • msimoneau4
    • Ally Hawkins3
    • Amirhossein Naghsh Nilchi3
    • Charlotte Soneson3
    • Deepak Tanwar3
    • Emma Dann3
    • Florian Heyl3
    • Hans-Rudolf Hotz3
    • Heather Gibling3
    • Ilya Sytchev3
    • Jaclyn Taroni3
    • Jcarlevaro3
    • Jen O'Malley3
    • Joshua Shapiro3
    • Lukas Heumos3
    • Lukas Weber3
    • Marisa Loach3
    • Marius van den Beek3
    • Pablo Moreno3
    • Philipp A.3
    • Stefano Mangiola3
    • Stephanie J. Spielman3
    • Stéphanie Robin3
    • TaniaW3
    • Teresa Müller3
    • Wolfgang Maier3
    • Xavier Garnier3
    • eberdan3
    • hwick3
    • zhibinlu3
    • Åsa Björklund3
    • Alexandru Mahmoud2
    • Andrea Bagnacani2
    • Anika Erxleben2
    • Anna Schaar2
    • Benedetta Manzato2
    • Candace Savonen2
    • Christopher Bottoms2
    • CicoZhang2
    • Darío Hereñú2
    • David López2
    • Eija Korpelainen2
    • Elizabeth Partan2
    • Federico Marini2
    • Giovanni Palla2
    • Gregor Sturm2
    • Isaac Virshup2
    • Isabel Duarte2
    • Jonathan Manning2
    • Jose Alejandro Romero Herrera2
    • Kelsy Cotto2
    • Laurent Gatto2
    • Luca Cozzuto2
    • Malachi Griffith2
    • MalteDLuecken2
    • Maria Lehtivaara2
    • Mark Robinson2
    • Martin Emons2
    • Matthias Bernt2
    • Mohammed2
    • Show N_FILTERS more
    • Resource type
    • slides6
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets9
    • Associated Workflows8
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Transcriptomics

and Contributors: Cristóbal Gallardo

11 materials found
  • e-learning

    Genome-wide alternative splicing analysis

    ••• Advanced
    Transcriptomics Transcriptomics alternative splicing isoform switching
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Introduction to Transcriptomics

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Network analysis with Heinz

    • Beginner
    Transcriptomics Transcriptomics metatranscriptomics network analysis
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics miRNA plants stress tolerance
  • e-learning

    Pre-processing of 10X Single-Cell RNA Datasets

    • Beginner
    Transcriptomics 10x Single Cell
  • e-learning

    Reference-based RNA-Seq data analysis

    • Beginner
    Transcriptomics QC Transcriptomics bulk collections cyoa deutsch drosophila español italiano …
  • slides

    Network Analysis with Heinz

    • Beginner
    Transcriptomics Transcriptomics
  • slides

    Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies

    • Beginner
    Transcriptomics Transcriptomics
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.