Training materials
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Competency level: Intermediate
and Contributors: Diana Chiang Jurado
and Licence: Creative Commons Attribution 4.0 International
6 materials found
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ELIXIR TeSS
e-learning
Content Tracking and Verification in Galaxy Workflows with ISCC-SUM
•• IntermediateImaging Data handling Data management Data sharing Imaging Validation -
ELIXIR TeSS
e-learning
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
•• IntermediateImaging Conversion Imaging Multi-channel image Object feature extraction ROI selection -
ELIXIR TeSS
e-learning
Voronoi segmentation
•• IntermediateImaging Image segmentation Imaging Multi-channel image Object counting Overlay Tessellation -
ELIXIR TeSS
e-learning
Using BioImage.IO models for image analysis in Galaxy
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
ELIXIR TeSS
e-learning
Multi-sample batch correction with Harmony and SnapATAC2
•• Intermediate10x Single Cell epigenetics -
ELIXIR TeSS
e-learning
Tracking of mitochondria and capturing mitoflashes
•• IntermediateImaging Imaging Isolated object tracking Temporal analysis Time-lapse data