Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Biological sequences3
    • Community analysis3
    • Environmental microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Sequence analysis3
    • Sequence databases3
    • Shotgun metagenomics3
    • Taxonomy3
    • Assembly1
    • DNA metabarcoding1
    • Disease1
    • Environmental metabarcoding1
    • Epidemiology1
    • Function analysis1
    • Functional analysis1
    • Metabarcoding1
    • Metatranscriptomics1
    • Pathology1
    • Protein function analysis1
    • Protein function prediction1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence assembly1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • taxonomy_krona_chart3
    • FastQC2
    • MetaPhlAn2
    • MultiQC2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • Cutadapt1
    • FastTree1
    • Flye1
    • GraPhlAn1
    • HUMAnN21
    • KrakenTools1
    • Krona1
    • MLST1
    • Medaka1
    • Minimap21
    • NanoPlot1
    • Newick Utilities1
    • SAMtools1
    • SortMeRNA1
    • export2graphlan1
    • fastp1
    • ggplot21
    • humann1
    • kraken21
    • mothur1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • Microbiome3
    • microgalaxy3
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • cyoa1
    • metatranscriptomics1
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut3
    • Saskia Hiltemann2
    • Emma Leith1
    • Engy Nasr1
    • Paul Zierep1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Subina Mehta1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann592
    • Helena Rasche501
    • Björn Grüning420
    • Bérénice Batut261
    • Nicola Soranzo179
    • Martin Čech128
    • Anthony Bretaudeau107
    • Cristóbal Gallardo104
    • Niall Beard90
    • Toby Hodges79
    • Wendi Bacon77
    • Nate Coraor70
    • François Michonneau67
    • Armin Dadras64
    • Gildas Le Corguillé63
    • Erin Becker61
    • Marius van den Beek60
    • William Durand59
    • Zhian N. Kamvar58
    • Mine Cetinkaya-Rundel56
    • Robert Andrews55
    • Simon Gladman54
    • Tracy Teal53
    • Katrin Leinweber52
    • Raniere Silva52
    • W. Trevor King50
    • maneesha50
    • Andy Boughton49
    • Beatriz Serrano-Solano48
    • Teresa Müller48
    • Katie Anne Mills47
    • Lucille Delisle46
    • Maxim Belkin46
    • Mehmet Tekman46
    • Yvan Le Bras45
    • Canadian Bioinformatics Workshops43
    • Munazah Andrabi43
    • David Pérez-Suárez42
    • Gabriel A. Devenyi42
    • Abby Cabunoc Mayes41
    • EvanWill41
    • Ian Lee41
    • Jon Pipitone41
    • Jonah Duckles41
    • Michael Hansen41
    • Piotr Banaszkiewicz41
    • Brandon Curtis40
    • David Mawdsley40
    • Greg Wilson40
    • Jemma Stachelek40
    • Pavankumar Videm40
    • Remi Rampin40
    • Allen Lee39
    • Andrew Sanchez39
    • Michael R. Crusoe39
    • James Allen38
    • Jeff Oliver38
    • Joel Nothman38
    • Nick Young38
    • Rémi Emonet38
    • naught10138
    • Rayna M Harris37
    • William L. Close37
    • Marie Josse36
    • Wolfgang Maier36
    • Melanie Föll35
    • Sarah Brown35
    • Anup Kumar32
    • Gerard Capes32
    • Maria Doyle32
    • trk30
    • Ana Conrado29
    • Stephan Druskat29
    • K.E. Koziar28
    • Simon Bray28
    • Subina Mehta28
    • Alex Whan27
    • Renato Alves27
    • Christina K.26
    • Paula Andrea Martinez26
    • Anne Fouilloux25
    • Michael Joseph25
    • Anthony Gitter24
    • Donny Vrins24
    • João Rodrigues24
    • Geert van Geest23
    • Peter van Heusden23
    • Sarah Stevens21
    • Wolmar Nyberg Åkerström21
    • actions-user21
    • Henry Schreiner20
    • Hilmar Lapp20
    • Julia Jakiela20
    • Robert Davey20
    • Bazante Sanders19
    • Leonid Kostrykin19
    • The Gulbenkian Training Programme in Bioinformatics19
    • Anton Nekrutenko18
    • Elin Kronander18
    • Niclas Jareborg18
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Engy Nasr

3 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data

    • Beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    Analyses of metagenomics data - The global picture

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.