Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Algorithms19
    • Computer programming19
    • Data structures19
    • Programming languages19
    • Software development19
    • Software engineering19
    • Comparative transcriptomics8
    • Transcriptome8
    • Transcriptomics8
    • Exometabolomics5
    • LC-MS-based metabolomics5
    • MS-based metabolomics5
    • MS-based targeted metabolomics5
    • MS-based untargeted metabolomics5
    • Mass spectrometry-based metabolomics5
    • Metabolites5
    • Metabolome5
    • Metabolomics5
    • Metabonomics5
    • NMR-based metabolomics5
    • Biodiversity4
    • Computational ecology4
    • Ecoinformatics4
    • Ecological informatics4
    • Ecology4
    • Ecosystem science4
    • Exomes4
    • Genome annotation4
    • Genomes4
    • Genomics4
    • Personal genomics4
    • Synthetic genomics4
    • Viral genomics4
    • Whole genomes4
    • Assembly3
    • Computational chemistry3
    • Epigenomics3
    • Sequence assembly3
    • Antimicrobial stewardship2
    • Bayesian methods2
    • Biological sequences2
    • Biostatistics2
    • DNA variation2
    • Descriptive statistics2
    • Gaussian processes2
    • Genetic variation2
    • Genomic variation2
    • Inferential statistics2
    • Markov processes2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Multivariate statistics2
    • Mutation2
    • Polymorphism2
    • Probabilistic graphical model2
    • Probability2
    • Sequence analysis2
    • Sequence databases2
    • Somatic mutations2
    • Statistics2
    • Statistics and probability2
    • Community analysis1
    • Content management1
    • DNA metabarcoding1
    • DNA polymorphism1
    • Data management1
    • Database management1
    • Document management1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • File management1
    • Informatics1
    • Information management1
    • Information science1
    • Knowledge management1
    • Metabarcoding1
    • Metadata management1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Microsatellites1
    • Molecular community analysis1
    • RFLP1
    • RNA metabarcoding1
    • Record management1
    • Research data management (RDM)1
    • SNP1
    • Shotgun metagenomics1
    • Single nucleotide polymorphism1
    • Taxonomy1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy34
    • BEDTools6
    • FastQC6
    • SAMtools6
    • DeepTools5
    • Falco3
    • HISAT23
    • Trimmomatic3
    • Workflow4Metabolomics3
    • xcms3
    • BCFtools2
    • BWA2
    • Cutadapt2
    • FreeBayes2
    • MultiQC2
    • STAR2
    • Stacks2
    • bx-python2
    • AUGUSTUS1
    • BamTools1
    • Bandage1
    • Bio3D1
    • GEMINI1
    • GOEnrichment1
    • Gromacs1
    • HUMAnN21
    • IWTomics1
    • JBrowse1
    • JBrowse 21
    • Krona1
    • MACS1
    • MAKER1
    • MDAnalysis1
    • MEME1
    • MetaPhlAn1
    • MethylDackel1
    • Peakachu1
    • RCAS1
    • RSeQC1
    • SNAP1
    • SPAdes1
    • Salmon1
    • SeqCode1
    • Subread1
    • The Protein Data Bank (PDB)1
    • Trim Galore1
    • Trinity1
    • UCSC Genome Browser Utilities1
    • UMI-tools1
    • Unicycler1
    • Vcflib1
    • VelvetOptimiser1
    • mothur1
    • scikit-learn1
    • seqtk1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN63
    • Show N_FILTERS more
    • Keyword
    • Development in Galaxy19
    • Transcriptomics6
    • Using Galaxy and Managing your Data5
    • biodiversity5
    • Ecology4
    • Metabolomics4
    • Computational chemistry3
    • EBV dataset3
    • Epigenetics3
    • Introduction to Galaxy Analyses3
    • microgalaxy3
    • prokaryote3
    • species populations EBV class3
    • work-in-progress3
    • workflows3
    • Assembly2
    • Contributing to the Galaxy Training Material2
    • EBV workflow2
    • Genome Annotation2
    • RAD-seq2
    • Single Cell2
    • Statistics and machine learning2
    • Variant Analysis2
    • collections2
    • genetic composition EBV class2
    • ChIP-seq1
    • EBV workflowz1
    • Galaxy Server administration1
    • Microbiome1
    • QC1
    • Teaching and Hosting Galaxy training1
    • ansible1
    • covid191
    • deploying1
    • deutsch1
    • español1
    • eukaryote1
    • gbif1
    • git-gat1
    • gmod1
    • interactive-tools1
    • italiano1
    • jbrowse11
    • maker1
    • modeling1
    • mouse1
    • species traits EBV class1
    • tags1
    • variant-analysis1
    • Show N_FILTERS more
    • Competency level
    • Beginner55
    • Intermediate5
    • Advanced2
    • Not specified1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International63
    • Show N_FILTERS more
    • Target audience
    • Students40
    • Galaxy Administrators20
    • Instructors3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut15
    • Björn Grüning13
    • Saskia Hiltemann11
    • Helena Rasche10
    • Gildas Le Corguillé7
    • Nicola Soranzo6
    • Anthony Bretaudeau5
    • John Chilton5
    • Simon Bray5
    • Anika Erxleben4
    • Clemens Blank4
    • Yvan Le Bras4
    • Anton Nekrutenko3
    • Jean-François Martin3
    • Maria Doyle3
    • Mélanie Petera3
    • Simon Gladman3
    • Wolfgang Maier3
    • Youri Hoogstrate3
    • Alex Ostrovsky2
    • Anne Pajon2
    • Christopher Barnett2
    • Cécile Canlet2
    • Dannon Baker2
    • Dave Clements2
    • Elisa Michon2
    • Florian Heyl2
    • Lucille Delisle2
    • Mallory Freeberg2
    • Martin Čech2
    • Nadia Goué2
    • Ross Lazarus2
    • Workflow4Metabolomics core team2
    • Anup Kumar1
    • Aysam Guerler1
    • Belinda Phipson1
    • Clara Urfer1
    • Cristóbal Gallardo1
    • Cyril Monjeaud1
    • Daniel Maticzka1
    • Dave B.1
    • Delphine Lariviere1
    • Devon Ryan1
    • Dilmurat Yusuf1
    • Erik Schill1
    • Erwan Corre1
    • Fabien Mareuil1
    • Fabio Cumbo1
    • Fidel Ramirez1
    • Friederike Dündar1
    • Gianmauro Cuccuru1
    • Graham Etherington1
    • Harriet Dashnow1
    • Hervé Ménager1
    • IGC Bioinformatics Unit1
    • Joachim Wolff1
    • Leily Rabbani1
    • Loraine Guéguen1
    • Marius van den Beek1
    • Marzia A Cremona1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Mo Heydarian1
    • Nate Coraor1
    • Olivia Doppelt-Azeroual1
    • Pavankumar Videm1
    • Sarah Peter1
    • Simon Benateau1
    • Stéphanie Legras1
    • Tharindu Senapathi1
    • Torsten Houwaart1
    • Verena Moosmann1
    • Vivek Bhardwaj1
    • Xi Liu1
    • Yann Guitton1
    • Show N_FILTERS more
    • Contributor
    • Gildas Le Corguillé
    • Saskia Hiltemann592
    • Helena Rasche501
    • Björn Grüning420
    • Bérénice Batut261
    • Nicola Soranzo179
    • Martin Čech128
    • Anthony Bretaudeau107
    • Cristóbal Gallardo104
    • Niall Beard90
    • Toby Hodges79
    • Wendi Bacon77
    • Nate Coraor70
    • François Michonneau67
    • Armin Dadras64
    • Erin Becker61
    • Marius van den Beek60
    • William Durand59
    • Zhian N. Kamvar58
    • Mine Cetinkaya-Rundel56
    • Robert Andrews55
    • Simon Gladman54
    • Tracy Teal53
    • Katrin Leinweber52
    • Raniere Silva52
    • W. Trevor King50
    • maneesha50
    • Andy Boughton49
    • Beatriz Serrano-Solano48
    • Teresa Müller48
    • Katie Anne Mills47
    • Lucille Delisle46
    • Maxim Belkin46
    • Mehmet Tekman46
    • Yvan Le Bras45
    • Canadian Bioinformatics Workshops43
    • Munazah Andrabi43
    • David Pérez-Suárez42
    • Gabriel A. Devenyi42
    • Abby Cabunoc Mayes41
    • EvanWill41
    • Ian Lee41
    • Jon Pipitone41
    • Jonah Duckles41
    • Michael Hansen41
    • Piotr Banaszkiewicz41
    • Brandon Curtis40
    • David Mawdsley40
    • Greg Wilson40
    • Jemma Stachelek40
    • Pavankumar Videm40
    • Remi Rampin40
    • Allen Lee39
    • Andrew Sanchez39
    • Michael R. Crusoe39
    • James Allen38
    • Jeff Oliver38
    • Joel Nothman38
    • Nick Young38
    • Rémi Emonet38
    • naught10138
    • Rayna M Harris37
    • William L. Close37
    • Marie Josse36
    • Wolfgang Maier36
    • Melanie Föll35
    • Sarah Brown35
    • Anup Kumar32
    • Gerard Capes32
    • Maria Doyle32
    • trk30
    • Ana Conrado29
    • Stephan Druskat29
    • K.E. Koziar28
    • Simon Bray28
    • Subina Mehta28
    • Alex Whan27
    • Renato Alves27
    • Christina K.26
    • Paula Andrea Martinez26
    • Anne Fouilloux25
    • Michael Joseph25
    • Anthony Gitter24
    • Donny Vrins24
    • João Rodrigues24
    • Geert van Geest23
    • Peter van Heusden23
    • Sarah Stevens21
    • Wolmar Nyberg Åkerström21
    • actions-user21
    • Henry Schreiner20
    • Hilmar Lapp20
    • Julia Jakiela20
    • Robert Davey20
    • Bazante Sanders19
    • Leonid Kostrykin19
    • The Gulbenkian Training Programme in Bioinformatics19
    • Anton Nekrutenko18
    • Elin Kronander18
    • Niclas Jareborg18
    • Show N_FILTERS more
    • Resource type
    • e-learning49
    • slides14
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows32
    • Associated Training Datasets31
    • Jupyter Notebook (with Solutions)1
    • Jupyter Notebook (without Solutions)1
    • Show N_FILTERS more
    • Collection
    • ELIXIR Biodiversity Community1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Hide disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Gildas Le Corguillé

and Include disabled: true

63 materials found
  • e-learning

    Genome Annotation

    • Beginner
    Genomics Genome Annotation prokaryote work-in-progress
  • e-learning

    Analyses of metagenomics data - The global picture

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy
  • slides

    Introduction to Metabolomics

    • Beginner
    Metabolomics Metabolomics
  • slides

    Mass spectrometry: LC-MS preprocessing - advanced

    • Beginner
    Metabolomics Metabolomics
  • e-learning

    Exome sequencing data analysis for diagnosing a genetic disease

    • Beginner
    Genetic variation Variant Analysis
  • e-learning

    Calling variants in non-diploid systems

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    Genome annotation with Maker

    ••• Advanced
    Genomics Genome Annotation eukaryote gmod jbrowse1 maker
  • e-learning

    Set up a Galaxy for Training

    • Beginner
    Teaching and Hosting Galaxy training
  • e-learning

    Creating Galaxy tools from Conda Through Deployment

    • Beginner
    Software engineering Development in Galaxy
  • e-learning

    JavaScript plugins

    • Beginner
    Software engineering Development in Galaxy
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.