Training materials
Competency level: Beginner
and Contributors: Helena Rasche
and Related resources: Jupyter Notebook (without Solutions)
23 materials found
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ELIXIR TeSS
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• BeginnerMIGHTS Single Cell jupyter-notebook paper-replication -
ELIXIR TeSS
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• Beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
ELIXIR TeSS
e-learning
Introduction to sequencing with Python (part one)
• BeginnerSoftware engineering Foundations of Data Science jupyter-notebook -
ELIXIR TeSS
e-learning
RO-Crate in Python
• BeginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
ELIXIR TeSS
e-learning
Best practices for workflows in GitHub repositories
• BeginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
ELIXIR TeSS
e-learning
Scripting Galaxy using the API and BioBlend
• BeginnerSoftware engineering Development in Galaxy jupyter-notebook -
ELIXIR TeSS
e-learning
Pangeo Notebook in Galaxy - Introduction to Xarray
• BeginnerClimate interactive-tools jupyter-notebook pangeo -
ELIXIR TeSS
e-learning
Python - Try & Except
• BeginnerSoftware engineering Foundations of Data Science jupyter-notebook -
ELIXIR TeSS
e-learning
Python - Files & CSV
• BeginnerSoftware engineering Foundations of Data Science jupyter-notebook