TeSS (Training eSupport System)

Training materials

Contributors: Helena Rasche

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501 materials found

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e-learning

Checking expected species and contamination in bacterial isolate

• Beginner
Ecology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy
e-learning

Inferring single cell trajectories with Scanpy

• Beginner
MIGHTS Single Cell paper-replication
e-learning

Filter, plot, and explore single cell RNA-seq data with Seurat

• Beginner
MIGHTS Single Cell paper-replication
e-learning

Generating a single cell matrix using Alevin and combining datasets (bash + R)

• Beginner
10x MIGHTS Single Cell jupyter-notebook paper-replication
e-learning

Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)

• Beginner
MIGHTS Single Cell jupyter-notebook paper-replication
e-learning

Filter, plot, and explore single cell RNA-seq data with Seurat (R)

• Beginner
MIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook
e-learning

Analyse Argo data

• Beginner
Climate argo earth-system ocean pangeo
e-learning

Introduction to sequencing with Python (part one)

• Beginner
Software engineering Foundations of Data Science jupyter-notebook
e-learning

Data visualisation Olympics - Visualization in R

• Beginner
Software engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook
e-learning

Identification of AMR genes in an assembled bacterial genome

• Beginner
Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …

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Training materials

Checking expected species and contamination in bacterial isolate

Inferring single cell trajectories with Scanpy

Filter, plot, and explore single cell RNA-seq data with Seurat

Generating a single cell matrix using Alevin and combining datasets (bash + R)

Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)

Filter, plot, and explore single cell RNA-seq data with Seurat (R)

Analyse Argo data

Introduction to sequencing with Python (part one)

Data visualisation Olympics - Visualization in R

Identification of AMR genes in an assembled bacterial genome