Training materials
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ELIXIR TeSS
slides
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics -
ELIXIR TeSS
slides
JBrowse
• BeginnerVisualisation -
ELIXIR TeSS
slides
EWAS Epigenome-Wide Association Studies Introduction
• BeginnerEpigenomics Epigenetics -
ELIXIR TeSS
slides
Introduction to metatranscriptomics
• BeginnerMetagenomics Microbial ecology Microbiome -
ELIXIR TeSS
e-learning
Finding the muon stopping site with pymuon-suite in Galaxy
• BeginnerMaterials Science -
ELIXIR TeSS
e-learning
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• IntermediateMetabolomics Metabolomics exposomics gc-ms metabolomics -
ELIXIR TeSS
e-learning
Supervised Learning with Hyperdimensional Computing
•• IntermediateStatistics and probability Statistics and Machine Learning -
ELIXIR TeSS
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• Beginner10x Single Cell epigenetics -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3 (R)
• BeginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
ELIXIR TeSS
e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing