Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly3
    • Sequence assembly3
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Antimicrobial stewardship1
    • Biodiversity1
    • Biological sequences1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Community analysis1
    • Comparative transcriptomics1
    • DNA metabarcoding1
    • DNA variation1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • Epidemiology1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Medical microbiology1
    • Metabarcoding1
    • Metagenomics1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence analysis1
    • Sequence databases1
    • Shotgun metagenomics1
    • Somatic mutations1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • Transmissible disease1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • Cutadapt2
    • FastQC2
    • QUAST2
    • BCFtools1
    • BEDTools1
    • BUSCO1
    • Bwa-mem21
    • COMBAT-TB Workbench1
    • FeatureCounts1
    • GOseq1
    • GenomeScope 2.01
    • HISAT21
    • JBrowse1
    • Jvarkit1
    • Merqury1
    • Minimap21
    • MultiQC1
    • QualiMap1
    • RSeQC1
    • SALSA1
    • SRA Software Toolkit1
    • annotatemyids1
    • dada21
    • gfastats1
    • limma1
    • phyloseq1
    • purge_dups1
    • snippy1
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • Assembly2
    • VGP2
    • biodiversity2
    • eukaryote2
    • microgalaxy2
    • pacbio2
    • 16S1
    • Microbiome1
    • Transcriptomics1
    • Variant Analysis1
    • bulk1
    • cyoa1
    • metabarcoding1
    • one-health1
    • prokaryote1
    • rna-seq1
    • tuberculosis1
    • viz1
    • Show N_FILTERS more
    • Competency level
    • Intermediate4
    • Beginner1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky2
    • Anton Nekrutenko2
    • Brandon Pickett2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Linelle Abueg2
    • Anna Syme1
    • Bérénice Batut1
    • Giulio Formenti1
    • Helena Rasche1
    • Iacopo Cristoferi1
    • Marcella Sozzoni1
    • Marek Ostaszewski1
    • Matti Hoch1
    • Myrthe van Baardwijk1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Linelle Abueg
    • Saskia Hiltemann287
    • Helena Rasche232
    • Björn Grüning218
    • Bérénice Batut129
    • Nicola Soranzo67
    • Cristóbal Gallardo56
    • Anthony Bretaudeau54
    • Niall Beard45
    • Martin Čech38
    • Teresa Müller35
    • Pavankumar Videm34
    • Armin Dadras33
    • Mehmet Tekman33
    • Gildas Le Corguillé31
    • Wendi Bacon30
    • William Durand30
    • Melanie Föll26
    • Beatriz Serrano-Solano25
    • Anup Kumar24
    • Wolfgang Maier24
    • Subina Mehta22
    • Maria Doyle20
    • Simon Bray20
    • Yvan Le Bras18
    • Deepti Varshney15
    • Tristan Reynolds15
    • Anne Fouilloux14
    • Julia Jakiela14
    • Lucille Delisle14
    • Nate Coraor14
    • Paul Zierep14
    • Leonid Kostrykin13
    • Pratik Jagtap13
    • Timothy J. Griffin12
    • Anton Nekrutenko11
    • Delphine Lariviere11
    • Diana Chiang Jurado10
    • Marie Josse10
    • Mélanie Petera10
    • Anna Syme9
    • Matthias Bernt9
    • Daniela Schneider8
    • Kaivan Kamali8
    • Mallory Freeberg8
    • Marisa Loach8
    • Marius van den Beek8
    • Pablo Moreno8
    • Simon Gladman8
    • Stéphanie Robin8
    • Amirhossein Naghsh Nilchi7
    • David López7
    • Katherine Do7
    • Verena Moosmann7
    • Alexandre Cormier6
    • Florian Heyl6
    • Hans-Rudolf Hotz6
    • Morgan Howells6
    • Paulo Cilas Morais Lyra Junior6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Christopher Barnett5
    • Clemens Blank5
    • Fabio Cumbo5
    • Peter van Heusden5
    • Clea Siguret4
    • Donny Vrins4
    • Ekaterina Polkh4
    • Florian Christoph Sigloch4
    • Bazante Sanders3
    • Coline Royaux3
    • Dave Clements3
    • Engy Nasr3
    • Enis Afgan3
    • Joachim Wolff3
    • Katarzyna Kamieniecka3
    • Mateo Boudet3
    • Miaomiao Zhou3
    • Natalie Whitaker-Allen3
    • Timon Schlegel3
    • Xavier Garnier3
    • Alex Ostrovsky2
    • Andrea Bagnacani2
    • Anika Erxleben2
    • Camila Goclowski2
    • Carlos Chee Mendonça2
    • Christine Oger2
    • Christoph Stritt2
    • CicoZhang2
    • Daniel Blankenberg2
    • Esteban Perez-Wohlfeil2
    • Fidel Ramirez2
    • Graeme Tyson2
    • Helge Hecht2
    • Igor Makunin2
    • Jasper Ouwerkerk2
    • Jennifer Hillman-Jackson2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Junhao Qiu2
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets
    • Associated Workflows4
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Linelle Abueg

and Related resources: Associated Training Datasets

5 materials found
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• Intermediate
    Transcriptomics Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Building an amplicon sequence variant (ASV) table from 16S data using DADA2

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy
  • e-learning

    M. tuberculosis Variant Analysis

    •• Intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• Intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• Intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.